Rhincodon typus (whale shark): 109921528
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Entry
109921528 CDS
T06055
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109921528 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109921528 (fan1)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
109921528 (fan1)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
109921528 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
109921528
NCBI-ProteinID:
XP_048473030
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All DBs
Position
36:complement(23208503..23222684)
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AA seq
811 aa
AA seq
DB search
MLSPLPKRPCSRLSLRARRDSLARGCIQATAPAPGCTAPKAQVALRSAEGNSGGIPCKLS
RRHRRAAPAQGERAAPGDGAAPAQGEGAAPGDGAAPAQGEGAAPAQGEGAAPANGAAQGE
GAAPANGAAQGEGAAPGNGAALGEGAALAQGDGLILEEGRPPLPYYLRNFLLVMETVLES
EDKELFNEADDHWLGTFQKLSVTGQKLYMRLFQRKLNWLKVTKLNYPEIGSDLTPIIEEL
RLVGLLLTESDLCNVSEALNLLSAPELKLLARNFHLRPQGQRAEILGSLLRLSKQQSIFS
CSQKPSSPGLALLNRVKKMIGNCVRVATPARAVFSRLLLLFNLTDYTDEEEAASAGQNQL
STVLLVNMGHVTFPNYTVLRKKKIFRHRDDLLRYDEAVHSLAEVITAMTNGFWSDALQIY
KTAREKWSQLENNSDVRFHQQLPVYLRRFTAGWVYTRIQFHGVEILQRLHMYAEAVEELQ
NLLEQSIYCPGSHGHWWNRLSLNLHQHLKQTDQAIHCLRKGLDDVSVHLGHRLALYQRAL
RIRDSPSCKKWCHLLQDLPVVSVEDVPHVTIKARSCPGMGNALFLMENISEGSSLGQGEP
CSTVICSVEEVSLAYYQQQGFDQGIHGEGTTFLTLFGLLFWDIIFLSGIPDVFRNPYQAC
PLDLYTDCFYEQRRECIESRVDFLENASIDTLCTLIADAWNGYRGINATLVNWEIFNSLQ
QVQSLVSCLGGPFLSGICRILAKDLRHGRGGLPDLVVWNSHRCQYKLAEVKGPSDQLSHK
QMVWLDQLQRLGADVEVCHVNAVGARSHQLS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctcctctcccgaagaggccgtgctcccgcctctcgctgcgggcgcgaagagac
tctttggcccggggatgtattcaggccacggcccctgccccggggtgtacagcgcctaaa
gcgcaagtagctctccggagtgctgagggcaatagcggcggcattccatgcaaactctcg
aggcggcatcggagagcggccccggcccaaggggaaagagcggcgcccggggacggagcg
gccccggcccaaggggaaggagcggcgcccggggacggagcggctccggcccaaggggaa
ggagcggccccggcccagggggaaggagcggcgccggcgaatggagcggcccagggggaa
ggagcggcgccggcgaatggagcggcccagggggaaggagcggcgccggggaatggagcg
gccctgggggaaggagcggccctggctcagggggacggattaatcctggaggagggtagg
cccccgctcccatattacttgaggaatttcttgctggtgatggaaacggttctggagagt
gaagataaagaacttttcaatgaagccgatgaccactggctgggaacattccagaaactc
tcagttactggccaaaagctctacatgcgactctttcaacggaagctgaactggttgaaa
gtgactaaactgaattatcctgaaattggttcagatctgacccccatcattgaggaactg
aggcttgtaggcttgttactgacagagtcagatttgtgcaatgtctcagaggccctgaac
ctgctgtctgctcctgaactcaaattattggcaagaaacttccatctgcgaccccagggt
cagagggcagaaatactggggtctctgctacgtttgtccaagcaacaatcgatcttcagc
tgcagtcagaagccatcgagtcctggcctcgccctcctcaacagggtgaagaagatgatc
ggaaattgtgtgagagttgctactccagcccgtgctgtgttctcacggctgttactactt
ttcaatctgacggactacacagatgaagaggaagcagccagtgctggccagaatcagctg
tccacagtgctgctggttaatatgggtcatgtcaccttccccaattacactgtgctgagg
aagaagaaaatattccgacacagagatgacctgctcagatatgatgaagccgtgcattct
ctggccgaggtgatcaccgcaatgaccaatgggttctggagtgatgctctccagatttac
aaaactgccagggagaagtggagccagctggagaacaacagtgatgtcaggtttcatcaa
cagctcccagtgtacctgcgacgtttcactgcaggctgggtctacacacggatccaattc
catggggttgaaattttacaacgactgcacatgtatgcggaagcagtggaggaattgcaa
aatcttttggaacaaagcatctattgtccaggcagccatggccattggtggaatcgactg
agtctaaatcttcaccagcatctgaagcagactgatcaagcaatccactgtttgcggaaa
ggtttggatgatgtctcggttcacttgggacatcggctggctttatatcagcgggcactg
cggattcgtgattccccaagctgcaagaaatggtgtcaccttcttcaggatctgccagtc
gtgagtgtagaggatgtgccacatgtgacgataaaggccaggtcatgcccagggatgggc
aatgctttattcctcatggagaacatcagtgaagggtcaagtttgggccaaggggaacct
tgcagtacagtgatctgttcagtggaggaggtttctctggcctactatcagcagcaaggt
ttcgatcagggaatacatggtgaaggaaccacattcttaacactctttggactgctcttc
tgggacattatctttctgtctggaatcccagatgttttccgaaatccctatcaggcatgc
cctctggatctctacactgactgtttctatgagcaacggagggaatgcattgagtcacgg
gtagacttcctggaaaatgcatccattgatactctctgcacactcattgctgatgcgtgg
aatggttacagaggcataaatgccacattagttaactgggaaatcttcaactcacttcag
caggtgcagagcctggtgagctgtctgggtggtccattcctaagtggtatttgtaggatt
ctggccaaagacttgaggcatggccgtgggggcctccctgatctcgttgtatggaacagc
cacagatgccagtataagcttgcagaagtgaaaggtccaagtgaccaactctcccacaag
cagatggtgtggctggaccagctgcagcgacttggggctgatgtcgaagtttgccatgtc
aatgcagtcggagcacggagccaccagcttagttaa
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