Rhincodon typus (whale shark): 109921533
Help
Entry
109921533 CDS
T06055
Symbol
slc8a3
Name
(RefSeq) sodium/calcium exchanger 3
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04260
Cardiac muscle contraction
rtp04261
Adrenergic signaling in cardiomyocytes
rtp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109921533 (slc8a3)
04020 Calcium signaling pathway
109921533 (slc8a3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
109921533 (slc8a3)
04261 Adrenergic signaling in cardiomyocytes
109921533 (slc8a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109921533 (slc8a3)
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109921533 (slc8a3)
Transporters [BR:
rtp02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
109921533 (slc8a3)
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Others
109921533 (slc8a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
109921533
NCBI-ProteinID:
XP_048456375
LinkDB
All DBs
Position
8:68197768..68610559
Genome browser
AA seq
921 aa
AA seq
DB search
MAWFKLQTFMSFCLQLGLIAVMLLMQPPHVDADTAGPTSSPKQNKSCVGSYECKQGVILP
IWYPEDPSLGDKIARVIVYFVALIYMFLGVSIIADRFMASIEVITSQEKEITMNKPNGET
TTTLVRVWNDTVSNLTLMALGSSAPEIMLSLIEVCGHGFKAGELGPSTIVGSAAFNMFII
IAICVYAIPDGETRKIKHLRVFFVTAAWSIFAYIWLYMILAVFSPGVVQVWEGLATFLFF
PVCVLLAWIADRRLLFYKYMHKKYRTNKSRALVIETEGEPPKGIEMDGKLVNSHVLDGML
VGLEGKEVDESRKEMIRILKELKQKYPEKELDQLVEIANYYALSHQQKSRAFYRIQATRM
MTGAGNILKKHAAEQAKRSASMHEVRADTPEDQCSQVYFEPCTYQCLENCGAVSLTVVRK
GGDISRTLVVDYKTEDGSANAGADYEFSEGTVVFKSGETQKEITVGIIDDDIFEEDEHFF
VRLSNIRVLELEDALEPNNVPYPKALIVSPLIATVTILDDDHAGIFTFESDVVRVSESIG
VIEVKVLRTSGARGTVIVPFRTIEGTAKGGGEDFEDTYGELEFKNDETLKAISVKINDAE
EYEKQEHFFIVLGEPKWMKRGISALLLAQEDSGRKLSIEEEEAKRIAEMGKPILGEHPKL
EVIIEESYEFKSTVDKLIKKTNLALVVGTHSWRDQFMEAITVSAAGDEEDEDTGEERLPS
CFDYVMHFLTVFWKVLFACVPPTEYWNGWACFVTSILIIGLLTAIIGDLASHFGCTIGLK
DSVTAVVFVALGTSVPDTFASKVAAAQDHYADASIGNVTGSNAVNVFLGIGLAWSVAAIY
WASQGKEFRVDAGTLAFSVTLFTIFAFISISILLYRRRPHIGGELGGPWGPRVITAMLFG
GLWLLYILFSSLEAYCYIKGF
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtttaagttgcagacgttcatgtcgttttgcctgcagttgggcctcatagca
gtcatgctgctaatgcagcctcctcatgtggacgcagatacagcgggcccgacaagttcc
cccaaacaaaacaaatcctgcgtgggcagctatgaatgcaagcaaggtgtcattctgcca
atatggtacccggaagatccatccctgggggataaaattgccagggttatcgtttatttt
gtggcactgatctacatgttcttgggagtctccattatcgccgaccgctttatggcatcg
attgaagtgattacatcgcaggagaaggaaatcaccatgaacaagccgaatggagagaca
accaccactctggttcgcgtctggaatgacactgtgtctaacctgaccctcatggctctg
ggttcatcggctccagaaatcatgctttccctgatcgaagtgtgcggccatgggtttaaa
gctggcgagctgggccccagtacaatcgtaggcagtgccgcttttaacatgttcatcatc
atcgccatctgcgtctacgctatccccgatggcgaaacgcggaaaattaaacatctgcgc
gtattttttgtcacggcagcctggagcatcttcgcctacatctggctgtacatgatcctc
gccgtcttttccccgggtgttgtgcaggtctgggaaggactggccaccttcctgttcttc
ccagtttgcgtcctgctggcttggatcgctgaccggaggctcctcttctacaagtacatg
cacaagaagtaccgcaccaacaagagcagggctctggtcatcgagaccgaaggggagccc
cctaaaggcatcgagatggatggcaagctggtcaactcgcatgtcctggacggcatgctg
gtgggtctggaaggcaaagaggtggacgagtctcgcaaggaaatgattcgcatcctcaag
gagctgaagcaaaagtacccggagaaagagctggaccagctggtggagatagcgaactac
tacgccctttcccatcagcagaagagccgggccttttaccgcatccaggccacccggatg
atgactggagctggcaacatcctgaaaaagcacgcagccgagcaggccaagaggagcgcc
agcatgcacgaggtgagggcggacactcccgaagaccagtgctcccaggtctacttcgag
ccgtgcacctaccagtgcctggagaactgcggggcggtctcgctcaccgtggtccgcaaa
gggggcgacatctccaggaccctggtggtggactacaagaccgaggacggctcggccaat
gcgggcgccgactacgagttcagcgaagggacggtggttttcaaatcgggcgagacgcag
aaggagatcacagtcggcatcatcgacgatgacatcttcgaggaagatgagcacttcttc
gtgcgcctgagtaacatcagggtgctggagctggaagatgccctggagccaaataacgtg
ccctatcccaaagctttaatcgtttccccgctgattgcaacagtgactattttagacgat
gaccacgcgggcatctttacctttgagagcgatgtcgtccgtgtgagtgagagcatcggg
gtgatagaggtgaaggtgctaaggacatctggggcacgcgggacagtcattgttcccttt
agaacaatagaagggacggccaaagggggcggagaagactttgaggacacttatggagag
ctggaatttaaaaatgatgagaccctgaaagccataagcgttaaaataaatgatgctgag
gaatacgaaaagcaagaacatttcttcattgtgcttggtgaaccgaaatggatgaaacga
ggaatatcagcactcttactggcacaggaggactctggtcggaaactttcaattgaagaa
gaggaggcaaaacggatcgcagaaatggggaaacccattttgggtgagcatccgaaattg
gaggtcatcattgaagaatcctatgaattcaagagcacagtggacaagcttataaagaag
acgaacctagcgctcgtggtagggacacattcctggcgggatcagttcatggaggccatc
acggtcagtgcagcaggtgatgaagaggatgaagacacaggagaggaacggctgccctcg
tgttttgactatgtgatgcattttctgaccgtcttttggaaggtcctgtttgcctgcgtg
cctccgactgaatactggaatgggtgggcctgctttgtcacgtccattctcatcattggc
ctcctaacagccatcattggtgacctggcctctcactttggttgcaccattggcctgaag
gactcagttacagctgtggtatttgtagctcttggcacctcagtaccagacacctttgcc
agcaaagtagcggccgcccaggatcactacgccgatgcctccattggaaatgtcacaggc
agcaacgcagtcaatgtcttcctgggcataggattggcatggtccgtggctgccatctac
tgggcgtcccagggcaaggaattccgtgtggatgcgggcaccctggccttttctgtcacc
ctcttcaccatctttgctttcattagcatcagcatcctgctgtacaggaggcggccgcac
atcgggggagagctgggcggtccgtggggaccccgtgtcatcactgccatgttgttcggg
ggtttgtggttactgtacattctgttttcttcgttggaggcttactgctacatcaagggg
ttctaa
DBGET
integrated database retrieval system