Rhincodon typus (whale shark): 109921607
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Entry
109921607 CDS
T06055
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03030
DNA replication
rtp03410
Base excision repair
rtp03420
Nucleotide excision repair
rtp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109921607 (rfc4)
03410 Base excision repair
109921607 (rfc4)
03420 Nucleotide excision repair
109921607 (rfc4)
03430 Mismatch repair
109921607 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtp03032
]
109921607 (rfc4)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109921607 (rfc4)
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109921607 (rfc4)
DNA replication proteins [BR:
rtp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109921607 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
109921607 (rfc4)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109921607 (rfc4)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109921607 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
109921607 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rad17
AAA_16
AAA_22
AAA_11
Mg_chelatase
DUF815
AAA_24
AAA_14
AAA_30
SLFN-g3_helicase
AAA_28
AAA_19
RuvB_N
ResIII
AAA_5
AAA_7
Kinesin
Toxin_7
Motif
Other DBs
NCBI-GeneID:
109921607
NCBI-ProteinID:
XP_048460359
LinkDB
All DBs
Position
13:complement(2925395..2946033)
Genome browser
AA seq
235 aa
AA seq
DB search
MQAFLKGPGVISSKPVKEKAAAGTSGENKKQKPVPWVEKYRPKCVSEVAFQEEVVAVLKK
SLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELYRKRILELNASDERGIQVIREKVK
NFAQLTVAGSRPDGKPAPPFKIVILDEADSMTNAAQAALRRTMERESKTTRFCLICNYIS
RIIEPLTSRCSKFRFKPLTDDIQQKRLLDICVKENMQCSDQVGLWCCVTCLEFKF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatttttaaaaggacctggagtgatcagctctaaaccagtgaaagaaaaagct
gcagcaggaaccagtggagagaacaaaaagcaaaaaccagttccatgggtggagaaatac
cgtccaaaatgtgtctctgaagtggcatttcaggaggaagttgtggctgtgctaaagaag
tcacttgaaggagctgatcttcctaatttgcttttttatggacctcctggcacaggaaaa
acttctacaatactcgctgcagcgagggaactttttggaccggagttgtaccggaagaga
attcttgaactaaatgcctctgatgaacgtggtatccaggttattcgagaaaaggtgaaa
aactttgcacaattgactgtagctggctctcgcccagatggaaaacctgctccaccattt
aaaatcgtcatcttagatgaagcagattccatgacgaatgctgcacaagctgctcttcgc
cgaacaatggaaagagaatcaaaaaccacacgtttctgcctaatttgcaactatatcagc
aggataattgaaccactaacatctcgatgttcaaagttccgttttaaacctttgacagac
gacatacagcagaaaaggttgctggacatctgtgtgaaggagaatatgcaatgcagcgat
caagtaggtctctggtgttgtgtgacatgtttagagttcaaattttaa
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integrated database retrieval system