Rhincodon typus (whale shark): 109921608
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Entry
109921608 CDS
T06055
Name
(RefSeq) eukaryotic initiation factor 4A-II
KO
K03257
translation initiation factor 4A
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109921608
03012 Translation factors [BR:
rtp03012
]
109921608
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109921608
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109921608
mRNA cycle factors
Stress granule specific factors
109921608
Translation factors [BR:
rtp03012
]
Eukaryotic type
Initiation factors
eIF-4
109921608
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109921608
Exosomal proteins of bladder cancer cells
109921608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
109921608
NCBI-ProteinID:
XP_020377222
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MSCGSADYSSKEHGPDGMDPDGVIESNWNEIVDNFDDMNLKETLLRGIYAYGFEKPSAIQ
QRAIMPCIKGFDVIAQAQSGTGKTATFAISILQQLELDMKESQALVLAPTRELAQQIQKV
ILALGDYMGATCHACIGGTNVRSEMQKLNAEAPNIVVGTPGRVFDMLNRGYISSRWIKMF
VLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE
ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTV
SALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR
IGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtggctctgcggattacagctctaaagaacatggcccagatggcatggaccca
gatggtgttattgaaagcaactggaatgaaattgttgataactttgatgacatgaatctg
aaggagactcttcttcgaggaatttatgcctatggatttgaaaaaccttctgctattcag
cagagggcaattatgccatgtattaaaggttttgatgtcattgcccaagcacagtctgga
actggtaaaacagccacatttgcaatctcaatcctgcaacagctggagctggatatgaaa
gaatctcaggctttggtcctggcccctaccagagaactagctcagcagatccagaaggta
atcctggccctgggggattacatgggtgctacttgccatgcctgcattggtggcactaat
gtacgaagtgagatgcagaagctgaacgcagaagctcccaacattgttgtaggaactcca
gggcgagtgttcgacatgttgaacaggggatatatatcttctaggtggatcaagatgttt
gtcctagacgaagctgatgaaatgttgagtcgtggattcaaagatcaaatctatgagatt
tttcagaaactgagcacgaacattcaggtggttctgttgtctgctacgatgcccagtgat
gtcttggaggtcaccaaaaaatttatgcgtgatccaatccgtatccttgtgaaaaaagag
gagctcacacttgagggtatcaagcagttttacatcaatgtggagagagaggaatggaag
ttggacactctttgtgacttgtatgaaactctaaccataacacaagctgtgattttcctt
aacacgaggaggaaggttgattggctaactgaaaaaatgcatgcaagggactttactgtt
tctgcattgcatggtgacatggatcagaaagaacgtgatgtgattatgagggaattccgt
tcaggatctagccgtgtacttatcactactgacttactggctcgtggcatcgatgtgcag
caggtgtctctagttattaactatgacttgcctacaaatcgtgagaactacattcacaga
attggtcgtggtggtcgctttggaaggaaaggtgttgctattaactttgttactgaagaa
gataaaagaattcttcgtgatattgagacattctacaatacaactgtggaagagatgccg
atgaatgtggctgacctgatctaa
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