Rhincodon typus (whale shark): 109921783
Help
Entry
109921783 CDS
T06055
Symbol
fubp3
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109921783 (fubp3)
03041 Spliceosome [BR:
rtp03041
]
109921783 (fubp3)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109921783 (fubp3)
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109921783 (fubp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
FUBP_C
Motif
Other DBs
NCBI-GeneID:
109921783
NCBI-ProteinID:
XP_048469595
LinkDB
All DBs
Position
28:complement(33245739..33352233)
Genome browser
AA seq
621 aa
AA seq
DB search
MAEYGSILTPAALGLNAGHSPGPKVEAFADALQRARQIAAKIDAGSHLNNSTPVVDPAVY
GYGTQKRTLDDGVVNQLGGMVHQRTIMSEEYKVPDKMVGFIIGRGGEQISRIQMESGCKI
QIAPDSGGLPERSCTLTGSPESIEEAKRLLGQIVDRCRNGPGFHNDIDSSNNAIQEIQIP
ASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPYKVQQAKEMVME
IIRDKDQGDFRRNEYGSRIGGNSIDVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD
DGIMTDRIAQVMGPPDRCQHASHMINELIHTAQERDGQSGFGGPGRGRGRGRSEWNMGPP
GGMQEITYTIPADKCGLVIGRGGETIKSINQQTGAHVELQRNPPPNSDPNIRIFIIRGAL
QQIEHARQLIEEKINGGPGPGGPGGFNTSPYSQGPPGHHQNGPPQAFMTQGWGSTYQPWQ
QQGQQDPSKAAQHLGTAAWSAYISQFYQQPSQQQQATMGQNSQQNSDQNGGQTGQMDYSK
AWEDYYKILAQATGTAQGTPQQSSQPDYSAAWAEYYRQQAAYYGQATQQGQAPGHQLPLK
SIQASSLNDSLWYRVPHSGHF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatggcagcatcctcaccccggcggcgctcggcctgaacgccggccactcg
cccggacccaaagtggaagctttcgccgacgcgctgcagagggcgcggcagattgctgct
aaaatagatgctggttcacatctgaacaattctactcctgtggtagatcctgcagtctat
ggctatgggactcagaaacggacactcgatgacggggtagtgaaccagcttgggggaatg
gtgcatcaaaggactataatgtctgaagagtacaaagtgcctgataaaatggttggattc
ataattggcaggggaggagaacaaatatctcggatacagatggaatctggctgcaaaatt
cagattgcacctgatagtggaggtctcccagaacggtcctgcacattgacgggttcacca
gagagcatagaagaagcaaaaagactcctaggacagattgtggatcggtgtcggaacggg
cctggctttcacaatgatattgatagttccaataacgctatacaggaaatccaaatcccg
gccagcaaagttggccttgtcattggcaaaggaggggaaaccattaaacaactacaggag
agaactggtgtaaaaatgataatgattcaggatggaccacttcccacaggtgctgacaaa
ccactgaggattacaggagatccttacaaagtacagcaagctaaagagatggtcatggaa
ataatcagagataaagatcaaggtgatttcagacggaatgaatatggttccagaattgga
ggaaatagtatagatgttgctgtacctaggtttgctgttggtattgtaataggaagaaat
ggtgaaatgataaaaaagattcaaaatgacgctggtgttagaattcaatttaaaccagat
gatggtataatgacagacagaattgctcaggtgatggggcctccagataggtgtcaacat
gcttctcatatgattaatgaacttattcatacagcgcaggaaagagatggtcagtctgga
tttggcggtcccggaagaggacggggtcggggtcgtagtgaatggaatatgggacctcca
ggtggcatgcaggaaataacatatacaatacccgctgataaatgtggcttagttattgga
agaggtggagagacgatcaaaagcatcaaccagcaaacaggagcacatgtagaactacag
agaaatccaccaccaaattctgatcctaatattcgaatattcattatccgtggagctcta
caacagatcgagcatgctagacagttaatagaagaaaaaatcaatgggggcccaggacct
ggtggccctggaggatttaacacaagcccttatagtcaaggaccacctggacaccatcaa
aatggcccaccacaagcttttatgacacagggatggggaagtacgtaccaaccttggcag
caacaaggacagcaggatccaagtaaagctgcacagcatttgggtacagcagcctggtca
gcctacatctcccagttttaccagcagcctagccaacaacagcaagcaacaatggggcag
aactcgcaacaaaattcagatcagaatggtggccaaactggtcagatggattattccaaa
gcctgggaggattactacaaaatacttgctcaggcaacaggaactgcccaagggactcca
cagcagagctcacaacctgactacagtgcagcctgggcagagtattatcgacaacaagca
gcgtactatggacaagccacacagcaagggcaggcccctggtcatcagcttccccttaag
agcatccaagctagtagcctcaacgactccttgtggtatcgagttccacattctggccat
ttttag
DBGET
integrated database retrieval system
