Rhincodon typus (whale shark): 109921840
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Entry
109921840 CDS
T06055
Symbol
rmnd5b
Name
(RefSeq) E3 ubiquitin-protein transferase RMND5B
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109921840 (rmnd5b)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109921840 (rmnd5b)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
109921840 (rmnd5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-Nse
Rtf2
zf-RING_2
RLIP76_Ral-bd
Motif
Other DBs
NCBI-GeneID:
109921840
NCBI-ProteinID:
XP_020377486
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All DBs
Position
12:1984477..2018298
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AA seq
392 aa
AA seq
DB search
MDQCVCVERELEKVLHKFLMYGQHCDRSLEELVQYVSGLRQELSSAGHLDAELSATLSLV
MSQCCKKIKDTVQKLASDHKDIHGSVSKVGKAIDRNFDTDVSGVGVDGVWDSPEKQQSLS
EAVVEHLYRQGLLNVAEELCRESGICIDLSQKEPFLELNRILEALRMRDLRPALEWAMAK
REKLLALNSTLEFKLHRLYFISLLTGGVINQIEALEYAKNFQPFAQQHQRDIQVLMGSLV
YLRHGVANSPYLHLLDANQWADICDIFTRDACALLGLSVESPLSVSFSAGCLALPVLLNI
KAVIEQQQCTGIWSQKDELPIEIELGKKCWYHSVFACPILRQQATESNPPMKLICGHVIS
RDALNKLINGGKLKCPYCPMEQAPADAKRIFF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgtgtgtgtggaacgggagctggagaaagtgctgcacaagtttctaatg
tatgggcagcactgtgaccgcagcttggaggaactggtacaatatgtcagcggcctccga
caggagttatccagtgcaggtcaccttgatgcagaattgtcagcgacactgtcactggtc
atgtcccagtgctgtaagaagataaaggacactgtccagaaactagcctctgatcacaaa
gatattcacggcagtgtctccaaagtgggaaaagctattgaccggaacttcgacactgat
gtgagtggtgtaggcgtggatggtgtctgggattcacctgaaaagcagcagtccttgagt
gaggctgtggtcgaacatttgtaccgacagggactgctaaatgttgctgaagaactgtgc
cgggaatccgggatatgtattgacctcagtcagaaggaaccctttctagaattgaacagg
atcctggaggcactgcgaatgcgtgacttgaggccagcattggagtgggctatggccaaa
cgggagaagctgctggctttaaacagcacgctggagttcaagttgcaccgattatatttc
attagtctgctgactggaggggtcatcaaccagattgaagccctggaatatgccaagaac
ttccaaccctttgcccaacagcatcaaagagacatccaggtgttgatggggagcctggtc
tacctgcggcatggcgttgcaaactctccgtacctccacctactggacgccaatcaatgg
gcagacatctgtgacatatttaccagggatgcctgtgccctcctaggcctatcagtcgag
tcgcctctcagtgtcagtttttctgctggttgcttggcattgcctgtcctgctgaatatt
aaggccgtgattgagcagcagcaatgcacagggatatggagccagaaggatgagcttcca
attgagatcgagctggggaagaagtgctggtaccattctgtctttgcctgccccatcctc
cgacagcaagccaccgaatctaaccctcccatgaagctgatctgtggacatgtcatctcc
agagacgcattaaacaaactgatcaatgggggaaagttaaagtgcccctattgtccaatg
gaacaagctcctgcagatgcaaaacggatctttttttga
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