Rhincodon typus (whale shark): 109921843
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Entry
109921843 CDS
T06055
Symbol
pcif1
Name
(RefSeq) mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase isoform X1
KO
K17584
phosphorylated CTD-interacting factor 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109921843 (pcif1)
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109921843 (pcif1)
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Gene cluster
GFIT
Motif
Pfam:
PCIF1_WW
WW
Motif
Other DBs
NCBI-GeneID:
109921843
NCBI-ProteinID:
XP_048464055
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Position
19:complement(53303851..53454271)
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AA seq
785 aa
AA seq
DB search
MRKAAGRSGLQDGGGGRAVKRRRDRGEDGSLPLFTRYTAGFKTDAKEMASENHSSLQADP
TVIVEAGTANKGQPSSPKSVKPVAQDLPDELVQAGWSKCWSRREKRPYYFNKFTNQSLWE
MPVFGQHDIISDPLGLNATVESSEGDSVADSGQRKRRHSDDTQQQSANSFKKPRIDAPLT
PTTLIIPISPIATATSSTPASRTSRTNSADEKQQLAPTSAQALAAASSSSSLSSPPMPAP
APAPAPVSIRPTAVYWDLDVPTNAVLKERPPIEMLPPHPDVEILRAQLTVKLRQHYQELC
QQREGIEPPRDSFNRWLLERKAIDKGKDPLLPSDCDPIVSPSMFREVMNDIPIRLSRIKY
REEARRLLFKYAESAKRMIESRNATPDVRKTVKWNVEDTFNWLRKEPSATKEDYMERLEH
LRKQCGPHVAAVAKDSVEAICGKIYNISGEYVKRVREKHLQLLKECNISEKVERPEVMDR
LVYCYPLRLAFPAIPLPRTDLHFENELACIRYKGEVRKISRNYLSKLEQLYKYSCIDDVR
FDKFLTRVWCLLRRYQSMFGVGTHEGTGFQGALPVPVFEALNKQFGVTFECFASPLNCYF
RQYCSAFPDTDGYFGSRGSFLTFSPVSGSFEANPPFGEELMDSMVTHMEELLGNSSEPLS
FIVFIPEWRNPPTPALVRMEESKFKRHQIIVPAYEHEYRSGSQHICKKEDIYYKAVHSTA
LIFLQNDAGFAKWEPAPDRVQQLMAAYKLTGKSSSSSSSSSSSSSSAGEKDQEQGRDQSS
NTVRH
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagcggcggggcgctccggattacaagatggaggcggcggtcgagcggtgaag
cggaggcgggatcggggggaagacggatcgctgccgctcttcactcgctacacagcaggt
ttcaagacagatgcaaaagaaatggcaagtgaaaaccacagtagtctgcaagcagacccc
acagttattgtcgaggcgggcacagccaacaaggggcagccttcatcaccaaagtctgtc
aaaccagtggcacaagatttaccagatgaactggttcaggcaggatggtcaaagtgttgg
agtaggagagaaaaaagaccatattacttcaacaagttcaccaaccagtcgctttgggaa
atgcctgtatttggacagcatgatataatttctgatcctcttggcttaaatgcaactgtg
gagtcaagtgaaggagattcagtagccgacagtggacaaaggaagcgacggcattctgat
gatactcaacaacaatcagcaaacagcttcaaaaaaccccgaatagatgcaccattgact
cccacgactttgataattcctatttctcctatcgccaccgccacttccagcacacctgcc
tccagaacaagcagaacaaattctgctgatgagaaacaacagctagcaccgacatcagca
caagcattggcagcagcatcctcctcctcctcattgtcttcaccacctatgcctgcacct
gcacctgcacctgcacctgtatctatccgtcctacagctgtgtactgggaccttgatgtt
ccaactaacgcagtgttaaaggagcgtcctccaattgagatgcttccaccgcatccagat
gtggaaatattacgtgcacagctgacagtgaaactgaggcaacactaccaggagctctgc
caacaaagagaagggattgagccacctcgtgactcttttaatcgttggcttttggagcgc
aaggccatcgataaaggcaaggacccactgcttcccagtgactgtgatcctattgtctct
ccctctatgtttcgtgaagtgatgaatgacattcctatcaggttgtctcgcattaagtac
agggaagaagcccggaggctgcttttcaaatatgctgagtctgcaaaacgaatgattgaa
tccagaaatgctaccccagatgtcaggaaaactgtgaagtggaatgttgaagatactttc
aactggctacgaaaagaaccatctgctacaaaggaagattatatggagagacttgagcac
ttgcggaaacagtgtgggccccatgtagcagcagtggcaaaagattcggtagaagcaatc
tgtgggaagatctacaacatatctggtgaatacgtgaagcgggtccgtgaaaagcattta
cagttactcaaagagtgcaatatatcagaaaaggtggagagaccggaggtaatggacaga
ttggtgtactgctaccctttgagactcgcattccccgcaatcccactcccacgtactgat
ttgcactttgagaatgaacttgcctgtatacgatataaaggagaagttagaaaaatcagc
cggaactacttgagtaaactggaacagctctataagtacagttgtattgatgatgtgcga
tttgataagttcttgacaagagtctggtgcttactcaggaggtaccagtccatgtttggt
gttgggacacacgaaggcactggctttcagggggctctaccagtacctgtgtttgaagct
ctgaacaaacaatttggcgtaacgtttgagtgttttgcctcaccactgaactgttatttc
agacagtattgctctgcgtttcctgacactgatggttactttggatccaggggctcattc
ttgactttctcaccggtcagcggctcctttgaagcaaaccctccgtttggtgaagagctg
atggactctatggtcacacacatggaggaactattgggaaactcaagtgagccactttca
ttcatagtgttcattcctgaatggaggaaccctccaacaccagctctggttcggatggag
gagagcaagtttaaacgacaccaaatcatagtgccagcctatgagcatgagtacaggagt
ggatcacagcacatctgcaaaaaggaggatatctactataaagctgtgcattctacagct
ctcatcttcctgcagaatgatgctggctttgcaaaatgggagcccgcgcctgatcgggtc
cagcagctaatggcagcctataaactgacaggaaagtcatcttcatcctcctcctcatcc
tcatcctcctcatcgtcagctggcgagaaagaccaggaacagggtcgggaccaaagcagc
aacactgtgcgtcactga
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