Rhincodon typus (whale shark): 109921873
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Entry
109921873 CDS
T06055
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109921873 (irx5a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109921873 (irx5a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
109921873
NCBI-ProteinID:
XP_020377517
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All DBs
Position
15:41885631..41888514
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AA seq
453 aa
AA seq
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MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPTAAFTSYVGSPYDHSTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATRDA
TATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNR
SEDEEEEENIDLEKNDDEEPPKSLEKGNSSESETGNQKTNIVEIACERFEEQDPSKESGQ
ILCDSELKDAEERETIHSPKATTSSLVVPPGAELLHESNDPELENAHTNRTHTLPSNTAN
CNVTSVIHSPPATSSKPKLWSLAEIATSDKSKEQSELLQSACPGQGCGVSASASSPSRSP
CPYPNSAVLGRPLYYTSPFYTGYTNYGSFGHLHSHHGGNSTTHFSSNGLSQTVLSRAEAL
AKLCPEAKTKSPAQIDHCKDTSSYDLKKGMSNI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggctacttgtaccaaccgtcagcttctttagctctttactcgtgt
ccagcgtacagcacaagcgtaatatcgggacccaggacggatgaactcgggagatcttct
tcgggatctgcgtttagtccgtacgccggatcgacagcgtttacagctccttccccaggc
tataatagccacctccagtacggtacagacccgaccgctgctttcacttcctacgtgggc
tctccctatgatcactcgacgggaatggctggatctataggatatcacccgtacgctgct
cctttaggttcttatccctatggtgacccagcttaccgaaaaaatgccaccagagatgcc
actgccaccctgaaagcctggctcagcgagcacaggaagaatccttatcccaccaaaggc
gaaaagatcatgttggccattatcaccaaaatgactctgactcaagtctccacttggttc
gcgaatgccaggaggagactgaagaaagagaacaagatgacctggactcccagaaacagg
agcgaagacgaggaggaagaagagaacatagacctggaaaaaaacgacgatgaagagccg
ccgaaatctttagaaaagggaaactcgtcggaatcagagacagggaatcagaaaacgaac
atagtagaaatcgcctgtgaaagatttgaggaacaagatcccagcaaagaaagtgggcag
atcctttgcgattcggaattaaaagacgcagaggaaagagaaaccattcactcccccaaa
gccactacttcttctctggttgtgcctcctggagctgagctcttacacgaaagcaacgac
cctgaattggaaaatgcacatacaaaccgaactcacactcttccgagtaacacagcgaac
tgcaatgtgacttcagtcatccattcccccccggcaacaagctccaagcccaaactctgg
tctctggcggaaatcgccacctcggacaagtcgaaggaacagagcgagctactacagagt
gcgtgcccgggtcagggttgcggcgtgtcggccagcgcctcgtctccgtcccgttcccct
tgtccttacccgaacagcgccgtgctgggtcggcctctctactacacctcgcccttctac
acgggctacacgaactatggcagcttcgggcaccttcacagccaccacggaggtaacagc
acaacacacttcagttccaatggattaagccagactgtcttaagcagagcagaggctctg
gcaaaactctgtccggaagctaaaacaaagagcccggcacaaatagatcattgcaaggac
acatcgtcttatgatttgaagaaaggtatgtccaatatttaa
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