Rhincodon typus (whale shark): 109922045
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Entry
109922045 CDS
T06055
Symbol
sars2
Name
(RefSeq) serine--tRNA ligase, mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109922045 (sars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtp01007
]
109922045 (sars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109922045 (sars2)
Enzymes [BR:
rtp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
109922045 (sars2)
Amino acid related enzymes [BR:
rtp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
109922045 (sars2)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109922045 (sars2)
Prokaryotic type
109922045 (sars2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TPR_TmcB
Lectin_N
Motif
Other DBs
NCBI-GeneID:
109922045
NCBI-ProteinID:
XP_048474382
LinkDB
All DBs
Position
39:5076890..5165485
Genome browser
AA seq
516 aa
AA seq
DB search
MAAPWCKRLLQRWVFSSGPIPRALRSGSRLSATRLESPVRCIFLRAYCCKSSLYEHVRDG
YSDRPQLDMGLVCSHTQAVLDNVHNRKGELTGEDVADIVSTWKQLVKTKVEIEKLENEKN
RISDSVKALLDKHNKEALQSHPDFSRLRNRGKEIRLELNFLYNQENQLDEHFYLKALKLP
NWTHPSVPVGDESQARVVEIVGEKPGENLQLSIMTVQRIRLAHVSGHRSYYLRGAGSELQ
HALVQFTMSKLLNKGFTPVTVPDMLRGAVFEGCGMRPNAKASQVYQLDPTRFEDLCLAGT
AEVGIAGYFMDHAVNLQDLPVRMVCCSTCYRAETDTGREAWGLYRVHHFTKVEMFGMTAA
ETGSESTELLEEFVMLQKEIFSDLGLHYKVLDMPTQELGLPAYRKFDIEAWMPGRGSYGE
LSSASNCTDYQSRRLNIMYYEEAAQLKYVHTVNATACAVPRTLIAILECNQLKDGSVRVP
AVLQPYLGKEVISHPTHSPLRYIGPNQYQRNLTKAQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccctggtgcaagcggctcctccagcgatgggtcttctcttcgggccctatc
ccccgggccttgaggagcgggagccgtttgagcgctacccggttagaaagccccgtccgc
tgcatcttcctccgggcttactgctgcaagagcagcctgtatgaacacgtgagggacggg
tactctgacaggccccagctggacatggggctggtctgcagtcacacacaggctgtgctc
gataatgtgcacaatcgcaagggcgagctgaccggggaggatgtggctgacatcgtctct
acatggaaacaattggtgaaaacaaaggtggaaatcgagaaattagaaaatgagaaaaat
agaatcagtgattcagttaaagccctcctggacaagcacaataaagaagcccttcaatct
catcctgatttctcaagactgcgaaaccgaggaaaggaaattcgcctggaattaaatttt
ctttataatcaagagaaccagctggatgaacacttttatctaaaggccttgaagctaccc
aactggactcatccaagtgtgcctgtaggtgatgagagccaggctcgtgtggttgaaatc
gtcggtgagaagccaggtgagaatcttcagttatcgataatgacagtgcagagaatccga
ctcgctcatgtttctggccatcgatcatactacctacgtggagcaggcagtgaactgcag
cacgccttggtccagtttacaatgagcaagctcctcaacaagggcttcacgccagtaact
gtgccagatatgctgagaggcgctgtgtttgaaggctgcgggatgcggcccaatgccaaa
gcctctcaggtttaccagctcgatccgactcgttttgaggatctgtgcctggcaggaaca
gctgaggttggcatcgcaggttatttcatggaccatgctgtgaacctgcaggatctgcct
gtgaggatggtgtgttgcagtacgtgctacagagcagagacagacactgggagggaggcc
tggggactctacagagtccaccatttcaccaaggttgagatgtttggaatgacggcagca
gagacagggagtgagagcacagagctcctggaggagtttgtgatgctgcagaaggagatc
ttctctgatcttggactccattacaaggtgttggatatgccgactcaggaacttgggctt
ccggcttatcgtaaatttgacatcgaagcatggatgcccgggaggggtagttatggagag
ctttcaagtgcatctaactgcacagactaccagagcagaaggttgaacatcatgtattat
gaggaagctgctcagctgaaatatgttcacactgttaatgccactgcctgtgctgtaccc
cgcacgctaatcgctatcttggaatgtaaccagctgaaggatggcagcgtgcgggtacca
gcggttctccaaccctacctcggcaaagaagtgatcagtcatcccacccacagcccgtta
cgttacatcgggccgaaccagtaccagaggaacctcaccaaggcccagtga
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