Rhincodon typus (whale shark): 109922130
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Entry
109922130 CDS
T06055
Symbol
hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109922130 (hdgfl2)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109922130 (hdgfl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Hydrophob_seed
Motif
Other DBs
NCBI-GeneID:
109922130
NCBI-ProteinID:
XP_048470115
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All DBs
Position
29:complement(9888744..9941826)
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AA seq
651 aa
AA seq
DB search
MPHSFKAGDLVFAKMKGYPHWPARIDDVAEGAVKPPSNKYPIFFYGTHETAFLGPKDIFL
FEKYKDKYGKPNKRKGFNEGLWEIQNNPNVSFTAPLPSSSSDSEVPENEVVPGSGAEVEK
EVSDEESDKGSIEQSGIKRKPLLTKKPPPKRTRKSSEEEEEESGSNSLEENSEASSSESE
KNSDQEFTLEKKVISRTPRRGPAAGRKKKKYDSEEEEEDEKQVGSDEEERSVQAKEDDDD
EDYKRESDSDDSVKKPVRGRKPAAQKKTPKPRGRKPKIERLPSVSSSLSSDSDSDAEGKI
SDWKKRDEERKRELEERRKKQQEEELRRLREKEREEEEEEKRKRKEEKEKEEEQDKILED
VDEIKKKESSKKTKKNRTKLKYASDSDSEVEKEVKKKPKKPHPEPTNKQNQLKKEKEPKE
RKRKLEDRHKAKLAKAEKEKKKEEKLQARKLEKKKEMTAEQKLQKIHTDIKHALKVDSPD
VKKCVEVLEELRTLQVTTQLLQKHCDLVATLKKIRRYKASQEVMAKASEIYSHLKSMFVG
GDDSGNSTLKKTHSDQEQQKNNQAKEEKEAENNMKENQDSVNGETASQKNEILPENQEHD
QSRGEREKNNEETLFGKQNSAPFKSAMLQSDDQHATDTEPVPMEMESANEN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacagtttcaaagctggagacctggtttttgccaaaatgaagggttatccccac
tggccggctcggattgatgatgtcgcagagggagctgtgaaaccaccatcaaataaatat
ccaatttttttctatggcactcatgaaactgcatttttgggaccaaaagatattttcctt
tttgaaaaatacaaagacaaatatggaaaaccaaacaagaggaaaggattcaatgaaggt
ctgtgggaaatacagaacaatccaaacgtcagctttactgcaccactgccatcaagctca
tcagacagtgaagttccagaaaatgaagtggtcccaggaagtggagcagaagtggaaaaa
gaagtcagtgatgaggaatctgacaaaggcagcattgagcagagtgggatcaagaggaag
cccctccttacaaagaaaccacctccaaaacgcactcgtaaatcaagtgaagaggaggaa
gaggaaagtggctctaactcactggaagagaattctgaagcaagttcttcagaatctgag
aaaaatagtgaccaagaattcacactagaaaaaaaagtaatttccagaacaccccgacga
ggccctgcagctggaaggaagaaaaagaagtatgattctgaagaggaagaggaagatgaa
aagcaggttggtagtgatgaggaggagagatcggtacaagctaaggaagatgatgacgat
gaagattataagagagaatctgactctgatgactctgtaaagaaacctgtcagaggcagg
aagccagcagctcaaaaaaagaccccaaaaccccgaggaaggaagccaaagattgagagg
ttaccttcagtctccagcagcctcagcagtgacagtgacagcgacgctgaaggcaagatc
agcgattggaaaaaacgagacgaggagcgaaaaagagagctagaagaaaggaggaagaaa
cagcaagaggaagagctgagaaggttgagagaaaaagaaagggaggaagaagaggaagaa
aagaggaaacggaaagaagagaaagaaaaagaggaggaacaggacaaaatacttgaagac
gttgatgaaataaagaagaaagaatcatcaaagaagacaaaaaaaaatcgaactaaattg
aaatatgcctctgattccgactcggaggtggagaaggaggtgaaaaaaaagcctaagaaa
ccacatcctgagcccacaaataaacagaatcaactgaagaaagagaaggaaccaaaagaa
agaaaacgtaagctggaagaccgacacaaagcaaagttggccaaagcagaaaaggaaaag
aagaaagaagaaaagttgcaagctaggaaactagaaaagaaaaaagagatgacagcagag
cagaagcttcagaagatacacacggatattaaacatgctttgaaagttgacagccctgat
gtaaagaaatgtgtggaggtactggaagaactgcgaacattgcaagtcactacacaactt
ttgcagaaacattgtgatctggttgcaacattgaaaaagatacgccgctataaagctagt
caagaagttatggcaaaagcaagtgagatctacagtcatttgaagtccatgtttgtggga
ggagacgattctggcaacagtacactgaagaagactcattctgaccaggagcaacagaaa
aataaccaagccaaagaggagaaagaagctgagaacaacatgaaggaaaatcaggattca
gtaaatggagagacagcatctcagaaaaatgaaatacttccagagaaccaagaacatgat
cagtcacgaggagaaagggagaagaataatgaggaaacgttgtttggcaaacagaatagt
gctccattcaaatctgccatgcttcagtcagatgatcaacacgccactgacacagaaccc
gttccaatggagatggagtcagctaatgagaactga
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