Rhincodon typus (whale shark): 109922164
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Entry
109922164 CDS
T06055
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109922164 (ap5z1)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
109922164 (ap5z1)
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Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Motif
Other DBs
NCBI-GeneID:
109922164
NCBI-ProteinID:
XP_048465362
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All DBs
Position
21:39717061..39770033
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AA seq
802 aa
AA seq
DB search
MHRNREVQDEDLQKFCSRISTLLQNKEYNKEAIDSLQKLFLIVSATKYGRTLPRDVLQKL
HSTLCFLKAPQPVLVLCSAILREVLPSNSLTLSCDEVNDMKTMSLLSSIILPQGSINGDV
EAVCSRVLKLLESRQVESQGSRFLLPILSKVLDVAPTTLNEEQVNAVSKKLVDWLRYAST
LQGVPLSSGGFFSPRSRQPASILEVDGAVAGDFFTLLSIGHYYTEDQWLNMHSFSMIRKW
LLYFGASGVNSNDADEKSELDSSVMSMLSASSTSSRLMPPKERLREKTFEYCNRLIEQSD
RKAIKKSDSELQKACLIEAVTLLDLICQQDPSFVYRAFPVVKALYGRICADSGFTRALLP
VVQFYLNHSELAAVDSEAVYRHLFTKIPSELYHDSMVAFEFLQFCRKNRKTLSENVGIFH
KSFPNMFKFLAWNTPSLFTEFIELLPELIRQDTSLEILHSLLDLPCLTAALEAQLRSQTS
VASEKMITDQNRKTLNSAEAFQNLHYRSMFLYILRVEAGAGDTIDRLNLLHEVLLDMAQR
PRVIHCAQTVPILLQVFFNVVIQFADGPLINQLVLVILERSSLLYDIPEFKTEVQRVFSS
QLLVLCKLYPPLIVEQSKELLEFCATVSNIINKETFFTHVVWAIGEYVSFSYDRCCTVEQ
ITKFFETLEALLFEITQLRASACVPKYSPRVITVLMTTLAKLASRSQDLIPRVSMFLSKM
RPFVRSAMISSTYSEDDIQEILTRATELNNLLKAPNVAQVILGSSMDIANPRWYKDTNAS
LPLTLRTISKVLQRDPAPGFSA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaaacagagaagtacaagacgaagacctacagaaattctgctcccgcatttcc
acacttttgcagaataaagaatacaacaaggaggctattgattccctacagaaactcttc
ctgattgtctcagcaacaaaatatggcagaactcttcccagggatgtcctacagaaactc
cacagcaccttgtgtttcctgaaggcgccacagccagtccttgttctatgctcggctatt
ctgagagaggtcctgccaagcaattctttgactttatcttgtgatgaggtgaatgatatg
aaaaccatgagccttttatcgagtataatactgcctcaggggagtataaatggtgatgtt
gaagctgtgtgtagtcgtgttttgaaactgctagaatctcgccaagttgagagtcaaggt
tcacggtttcttctgcctatcttgtccaaagtccttgacgttgcacccacaactctcaat
gaagaacaagtgaatgctgttagtaagaagcttgttgattggctgcgttatgcaagtact
ctacaaggtgtccccctttcttctggaggcttctttagtccaagatcacgacagcctgct
tccattttagaggtggatggagcggtggcaggtgatttcttcacattactttccattggc
cattattacactgaggaccaatggctcaacatgcactctttctccatgatcagaaagtgg
ctgctgtattttggagcaagtggagtcaacagcaatgatgcagatgaaaagtctgaatta
gacagctctgtaatgtcaatgctttctgcttcctcaacatcaagtcgtctgatgccccct
aaagaacgtctgcgggagaagacgtttgaatattgcaatcggttaattgaacagagtgat
agaaaagctataaagaagtctgactctgaacttcagaaagcttgtcttattgaagcagtg
actttgttagacctgatctgtcaacaagatccttcgtttgtgtatcgagcctttccagtg
gtgaaagcactatatgggaggatctgtgcagactctggttttaccagagcgctgcttcca
gttgttcagttctatctaaatcacagtgaactggcagctgtggactctgaagctgtttac
agacacttattcaccaagatcccttctgaactataccatgactcaatggtggcctttgaa
tttctccagttttgcaggaagaatagaaaaacactgagtgaaaatgttggaattttccac
aagagctttccaaatatgttcaagttcctagcttggaacacaccatccttgttcactgaa
ttcattgaattgctgcctgaactgatccgtcaagacacatcgctggagatccttcattcg
ctgcttgacctcccttgcctgactgcagcacttgaagcccaactcaggtcacagacctct
gttgcaagtgagaagatgattacagatcagaacagaaagaccctgaactctgcagaagcc
ttccagaacctgcattaccgaagcatgtttttgtatattctccgggtcgaggcaggagct
ggggatactattgacagattaaacctacttcatgaggtgcttttggacatggctcagcgg
cctagagtcatacactgtgctcagactgtccccattctgttgcaggttttcttcaatgtt
gtcatccagtttgcagatggtccactgattaaccagctggttctggttatcctggagcgt
agcagtctcctgtatgacatccctgaattcaaaactgaagttcaacgagtattcagttcc
cagctgttggtattgtgtaaactatacccacctctaatagtagaacagtccaaagagctg
ctggaattttgtgcaacagtcagcaacatcatcaataaggagaccttcttcactcatgtg
gtttgggcaattggggagtacgtgtccttttcgtatgacagatgctgcacagtggaacaa
atcaccaagttctttgaaactcttgaagcattactttttgagatcacacagctgcgagcc
tctgcctgtgtccccaagtactcgccgcgggttatcactgttctcatgactacactggca
aaattagcatctcggagccaggacctgattccaagggtctctatgttcctgtccaagatg
aggccattcgttcgtagtgctatgatttcctccacatacagtgaggatgatattcaagaa
atcctgacccgtgccactgagctcaacaatctgttaaaagctccaaatgtagctcaggtt
atactgggatcctctatggacattgccaacccaagatggtacaaggataccaatgcttca
ctgccactcaccctgaggaccatcagcaaagtgctgcagagagacccagcaccaggattc
tctgcgtag
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