Rhincodon typus (whale shark): 109922198
Help
Entry
109922198 CDS
T06055
Symbol
otx1
Name
(RefSeq) homeobox protein OTX1 B
KO
K09326
homeobox protein OTX1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109922198 (otx1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109922198 (otx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
TF_Otx
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
109922198
NCBI-ProteinID:
XP_020377807
LinkDB
All DBs
Position
9:complement(1207385..1212478)
Genome browser
AA seq
317 aa
AA seq
DB search
MMSYLKQAPYGMNGLGLSGPGMELLHHSVGYPATPRKQRRERTTFTRSQLDVLESLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQNGGGGGSKARPPKKKCSPGRES
SGSDSSGQFTPPAASSSSGSGPSTNSNPASVLSTPAAAASIWSPASISPGAAGPEALSAA
GASCMQRCPSGSGSAYPLAYGQGSGYSGAYPASSSYFSGVDCSSYLAPMHSHHPPHPHHQ
LSAHSTTALSPMSSSPMPGHHLSQSPAHQGYSGPGLAFNSADCLDYKEQATSWKLNFNTS
DCLDYKEQAPSWKFQVL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaagcaggctccgtacgggatgaacggtctcgggctgagtggccct
gggatggagttactccatcactcggtgggatatcccgcgaccccgcgcaaacagcggaga
gagcgcaccacattcacccgctcccagctcgatgtgttggagtctctgttcgcaaaaact
cgttaccctgacatcttcatgagagaggaagtggcgttaaaaattaatcttcccgaatcc
agagtgcaggtttggtttaagaaccgccgagctaaatgccgccagcaacagcagaacggg
ggcggcggcggcagcaaggccaggccgcccaagaagaagtgttccccgggccgggagagc
agcggctcagacagcagcgggcagttcacgccgccagccgcctccagctcctcgggcagc
ggccccagcaccaactcgaacccggcctcggtgctcagcactccggcggcggcagcgtcc
atctggagcccggcgtcaatctccccgggggcggcgggccctgaagctctgagcgccgcc
ggcgcctcgtgtatgcagcgctgtccgtccggctcgggcagtgcctacccgctggcgtac
ggccagggcagcggctacagcggggcctatcccgcctcatcttcctacttcagcggcgtg
gattgcagctcgtacctggcacccatgcactcccaccaccctccccaccctcaccaccaa
ctctctgcccatagtaccactgcgctcagcccaatgagcagctccccaatgccagggcac
cacctcagtcagagcccagctcaccagggctacagcgggccaggactggcgttcaactcc
gccgactgtctggattataaagagcaagcaacatcttggaaactcaacttcaacaccagt
gactgtttggattataaagagcaggctccctcctggaagttccaagttttgtga
DBGET
integrated database retrieval system
