Rhincodon typus (whale shark): 109922240
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Entry
109922240 CDS
T06055
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rtp03110
]
109922240 (clpb)
Chaperones and folding catalysts [BR:
rtp03110
]
Heat shock proteins
HSP100
109922240 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_5
Ank_3
ClpB_D2-small
AAA_5
AAA
Ank_4
Sigma54_activat
Zeta_toxin
Torsin
AAA_22
KAP_NTPase
nSTAND3
AAA_16
AAA_3
AAA_14
ATPase_2
NACHT
RuvB_N
Bac_DnaA
AAA_24
YchF-GTPase_C
RNA_helicase
NB-ARC
SRP54
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109922240
NCBI-ProteinID:
XP_048453706
LinkDB
All DBs
Position
6:complement(2970505..3065923)
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AA seq
694 aa
AA seq
DB search
MAVSRATALVTRYLRAGCTPCGVWCWRRLLLPPRELGRGAASDRPAVAGGQPPPPLLLRS
VSEAPEAARGPLQLRPPAAAGRWLQASELQFSREATRWRFEPEPRLQLEAVATGRRSQQG
EDQREWALGTLGDLSILAAALVYCYSRSSESDGHQLLEAARLNNAPEVSRLLSSGVPASH
RHKLGWTPLMVAAMNKNHSVVKILLAAGADPNLGDGFSNVFETSREKRIHSLEVLVTRED
EFSNRLNTRASFRGCTALHYAVLVDDYQTIQLLLEAGANPLLQNEMGHTPVDYAREGQIK
TLLKEAEVKYQERQRKREAEERRRFPLEQRLKEHIIGQETAIATVAAAIRRKENGWADEE
HPLVFLFLGSSGIGKTELAKQIAKYMHNDVKKKFIRLDMSEFQEKHEVAKFIGSPPGYVG
HEEGGQLTKKLKQSPNGVVLFDEVDKAHPDVLTVMLQLFDEGRLTDGKGKTIECKDAIFI
MTSNVASEEIAEHALQLRQEAQELGKKRLAENLDDVLLSEKVTISKQFKENVIRPILKAH
FRRDEFLGRINEIVYFLPFCHSELIQLVNKELMFWAKKAKQRHNINLQWDREVMDVLAEG
YNLHYGARSIKHEVERRVVNQLAAAYEQELLPSGCTLRIAVEGSSVGTGREQDPEHREPD
SKGAKIRLEIVEKDKSRKLNIRVPLKGDEVAHRF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccagggcgacggccctggtaacacgctacctccgggccggctgcactccg
tgcggggtctggtgctggcgccggctactgctgccgccgcgggaactgggccgcggcgct
gcgtccgacagacccgcggtggctgggggtcaaccgccgccgccgctgctgctgcgaagc
gtctccgaggccccggaggcagctcgtgggccgctgcagctccggcctcccgccgccgcg
ggtcgctggctacaggcctccgagctgcagttctcccgtgaggccacgcggtggcgcttt
gaacccgagcccaggctgcagttggaggctgtggccacggggaggcgatcccagcaaggc
gaggatcagagagaatgggcactgggcacactgggcgacctctctatcctggcagctgcc
ctggtttattgctacagcaggtcatcggagtcagatggtcaccagctccttgaagctgcc
cgtttgaacaatgcacccgaagtcagcaggttgctgtcctctggtgtccccgcctcacat
cggcacaaactgggttggaccccactgatggttgcagcaatgaacaagaatcacagtgtg
gtgaagattctcttagctgctggtgcagatccgaatctcggagatgggttcagcaacgtg
tttgagacatcaagggagaaacgtatccactctctagaggtgctggtgaccagagaagat
gagttcagtaaccggttgaacacacgtgccagtttccgtggctgcactgcactgcactat
gctgtcctggttgacgactaccagaccatccagttgctgcttgaggctggtgctaatccc
ttgctgcagaatgaaatgggacacacaccagtggactatgccagagaaggacaaattaaa
acattactgaaggaggctgaggtgaagtaccaggaacggcagaggaagcgagaggctgag
gaacgtagacgttttcctttggaacagagactgaaggaacatatcattggccaggagact
gccatcgcaactgttgcagcagccatccgaagaaaggagaatggttgggcagatgaagag
cacccgctagtcttcctcttccttgggtcgtctggaattggtaaaactgagctggccaaa
cagattgcaaagtacatgcacaatgatgtcaagaagaaattcatcaggctcgacatgtca
gaattccaggaaaagcatgaagttgcgaagtttattggttcgccccctggttatgttgga
catgaggaaggtggtcagctcaccaagaagctgaaacagagtccaaacggggtggttttg
tttgatgaagtggacaaagctcatcccgatgtcctgacggtaatgctgcaactctttgat
gagggaagactaacagatggcaaaggaaagaccatagagtgtaaggatgcaatcttcatc
atgacctccaatgtagccagtgaggaaatagcagagcacgcgctacagctgagacaggaa
gcccaggagctgggcaagaaacgcctagctgagaatctagatgatgtgcttctgagtgag
aaagtgaccatctccaagcaatttaaagaaaatgtgatcagacccattctgaaggcccat
ttccggagggatgagtttctgggcagaatcaatgagattgtttacttccttcccttttgt
cattctgaactgattcagctggtcaacaaggagttaatgttttgggccaagaaggccaag
caacgacacaacatcaacctgcagtgggaccgggaggtgatggatgtattggcggaagga
tacaatttgcactacggagcaagatccatcaagcacgaggtggaacgacgtgttgtgaac
cagctggcagctgcctatgagcaggaacttctaccgagcgggtgcacactccgcatcgca
gtggaaggttcaagtgtgggtacggggagggagcaagacccagagcacagagagccggac
tccaagggagcgaagatcaggcttgagatcgtggagaaggacaagtcccgcaaactcaac
atcagggtcccgctgaaaggagacgaagtggcccacaggttttag
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