Rhincodon typus (whale shark): 109922310
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Entry
109922310 CDS
T06055
Symbol
sltm
Name
(RefSeq) SAFB-like transcription modulator
KO
K25093
SAFB-like transcription modulator
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109922310 (sltm)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Other domain-containing proteins
RRM domain-containing proteins
109922310 (sltm)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
109922310
NCBI-ProteinID:
XP_048471747
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All DBs
Position
33:complement(16747085..16790559)
Genome browser
AA seq
1060 aa
AA seq
DB search
MAAAPSPNEARRITDLRVVDLKSELKRRNLDISGVKTVLIARLKQVIEEEGGDPDNVQLF
SDTPSKKTPKSKGRRQDNDEAGGDVSTEDDGNSKMEADVDATQSDSQDTSDQDGLEEQKI
GEAEEMEKNDDSVIRELPTSGDDELDAKTPDEEEQEDQAEEENEELVLEEVDVLLPEEIF
QEPEEDENDKDVDDIDDGSREVSKSLPSEQGLAEAQQTVQVETEPSASLKEVDDDNISVT
IQAEDAITLDFDGDDLLETGKTVKTPEGENKSKAEKESPSQDDVKGEVKIEGKKEKNHKE
GRKEEGIKSESAKKETREGSRKAEAGDKEKDSSKKGPSSSGASNQAKSSSKDSKDKTATK
DEKGVNSTTGTSSGGASSSTKNLWISGLSSNTKAADLKNLFSKYGKVLSAKVVTNARSPG
ARCYGFVTMSSSAEMSRCISHLHRTELHGQQIFVERVKNDPFKKESITKDGTGKTGSSRS
SSDKKSSTGGKTASKTQVSSKKEDKKTEKPGERKESKDGSSSSKKPENKKDDKESAASAS
HDHSKKVEEKRRRSVKSSHRMVVIDKTKGEPVVSVKTAKKGKSEQTSISRSKERHIPCKP
SSRDRKDILPFEKIKQQKIRERLIRLERIRRAIELRRRREIAERQRRERERIRMIREREE
RDRLQRERERLEIEKQKLERERMERERLERERIRIEQERRKEIERIAREREELRRQQEQL
RYEQERRNSLKRPPDVDNRRDDPYWNEHKRRAMDHDARFGHGSDYSRQEPNRYNDFDHRV
PSFDRRGDRYNHQGEGKKNRSGSRREDTGYNRYPKPYNDSRRPSSQQRSELHANTERREI
RERDDRRTVTIQDRSAASRGHEHLQKMSPSRNFPDRNRMEDHGVHHSRPSHNSSRPDDWK
PSGSLGSTKHELRTSRERDRIRPERSGQNMRSGPPSGMAGYNSRDGGRPAIGDRGGNSQQ
SHYHDNRHVVVERHGRDSGGPRNSWHPGPGSQGTGYQDMRRMSDSRGPGMIPLSSPSVAN
RIVQITNNTMQGGSVSGSKGIHGSGDARFKPFKGGAPRRF
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctcctagtccaaatgaagctcggcgcatcacggacttgcgtgtcgtagat
cttaaatccgaactcaagcgacggaatctcgacattagcggtgttaaaaccgttctgatc
gccaggttaaaacaggtaatagaagaggagggaggcgatcctgataacgtgcagctcttt
tcggatacgccttcaaagaaaacacctaaaagcaaagggagaaggcaagataatgatgaa
gctggtggtgatgtcagcacagaagatgatggtaatagcaagatggaagcagatgtagat
gcaactcagagtgattcacaggacacaagtgatcaagatggattagaggagcaaaagatt
ggtgaagctgaggaaatggagaaaaacgatgattcagtcattagagagttgcctacaagt
ggagatgatgaactggatgctaaaacaccagatgaagaagagcaagaagaccaggcagag
gaagaaaatgaagagcttgttcttgaagaagtggatgtccttttgcctgaagagatattt
caggagccagaagaggatgagaatgataaagatgtagatgatatagatgacggttctcgt
gaagtgtctaaatctctaccttcagagcaaggccttgctgaagctcaacaaacagttcaa
gttgaaactgaacccagtgcatctttgaaggaagtggatgacgataatatttcagtcaca
atccaagcagaagatgccatcacactggacttcgatggagatgatcttttggaaacaggt
aaaactgtgaaaactcccgaaggtgagaataagtccaaagctgaaaaggagtccccatcc
caagatgatgtgaagggagaagtcaaaattgagggaaagaaagagaaaaaccataaggaa
ggaagaaaggaggaggggataaaatcagagtcagcaaagaaggaaaccagagaagggtcc
agaaaagctgaagctggagataaagagaaagattcttcgaagaaaggcccctcatcttct
ggggcatccaatcaagcaaagagttcaagtaaggattcgaaagataagacagctactaaa
gacgagaaaggtgtgaatagcactactgggactagcagtggcggtgctagtagttcgacc
aagaacctgtggattagtggattgtcttcaaacactaaagcagctgatctaaagaaccta
tttagcaaatatggcaaggttctgagcgcaaaagtagtaaccaatgcacgaagtcccggt
gctcgatgttatggatttgtgacaatgtcatcaagtgcagaaatgtctaggtgtatttcc
caccttcatcgcactgagctacatggacagcagatatttgttgaaagggttaaaaatgat
ccttttaaaaaagaatccataacaaaagacggaactgggaaaacgggttcaagcagaagt
agtagtgataaaaagagttcgacaggtggaaaaacagctagcaagacccaagtatcttcc
aaaaaagaggataagaaaacagaaaaacctggagagagaaaagaaagcaaagacgggtca
agctcttcaaagaaaccagaaaataaaaaggatgacaaggaaagtgcagcaagcgctagt
catgaccattcgaaaaaagtagaggaaaagaggcgaagaagtgtgaagagttctcatcgg
atggtggttattgacaagactaaaggtgaacctgtcgttagtgtgaaaactgcaaagaaa
ggcaagagtgagcagacttccatttcaagaagcaaagagagacatattccatgcaaacca
agctccagagacagaaaggatattttgccatttgaaaaaataaaacagcaaaagattcgt
gagcgtttgatcagattggaacgcatacgacgtgcaatagaattaaggaggcgtcgtgaa
atagctgaaaggcagcgtcgcgagcgggaacgcattcgcatgatacgtgaacgtgaagaa
cgtgatcgcttgcaacgagaaagagaacggttggagattgaaaaacaaaaacttgagaga
gagagaatggaacgggaacgactggaaagggaacgcatacgtattgaacaggaacgccgt
aaagaaatagagcggattgcccgtgaacgtgaagagcttcgtcggcaacaagaacagctc
cgctatgaacaagaaagaagaaattctttaaaacgcccacctgatgtagataacagacgt
gatgatccctattggaacgaacataaaaggagagctatggaccatgatgctcgatttggt
catggttctgattacagtcgccaagaaccaaaccgctacaatgactttgaccacagagta
ccatcatttgatagacgaggggatcgctacaaccatcaaggagaaggaaaaaagaatcgt
tctggcagccgcagagaggacaccggttataaccgatatccaaagccatacaatgattct
agaagaccatcttcccaacaaagaagtgaacttcatgcaaatactgagcggagagaaata
agggagagagatgaccggcgaactgtaacaattcaggatcgctcggctgctagcagggga
catgagcatctgcaaaagatgtctccatcaagaaactttcctgaccgtaataggatggag
gaccacggagtccatcacagtcggccaagtcataattcttctcgacccgacgattggaag
cctagtggtagcttgggctcgacaaaacatgaattaagaacttcgagagagagagatcgg
atacgcccagagaggtctggacaaaatatgcgaagtggaccaccaagtggtatggctggg
tataacagcagagatggtggaagacctgcaattggagacagaggtggtaattctcagcaa
tctcactaccatgataacagacatgtagtggtagaacgtcatggtcgtgattcaggagga
ccacggaacagttggcatcctggacctggttctcaaggcactggctatcaagacatgcga
cgaatgagtgacagtcgtggtcctggcatgattccactatccagtccttctgtagcaaac
agaattgtgcagatcaccaacaacacaatgcaaggaggcagtgtctcaggctccaaagga
atacatggatcaggagatgctcgttttaaaccattcaaagggggtgctccacgaagattc
tga
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