Rhincodon typus (whale shark): 109922339
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Entry
109922339 CDS
T06055
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X2
KO
K08489
syntaxin 16
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109922339 (stx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109922339 (stx16)
Membrane trafficking [BR:
rtp04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
109922339 (stx16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
ATG17_like
Syntaxin
Prominin
MCPsignal
DUF5345
DUF2116
WXG100
Endonuc_BglI
Gp56
ATRIP_mid
DUF4191
MASE10
Orf78
TRP
DUF6548
Motif
Other DBs
NCBI-GeneID:
109922339
NCBI-ProteinID:
XP_020377958
LinkDB
All DBs
Position
19:complement(56204651..56249959)
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AA seq
308 aa
AA seq
DB search
MATRSLTDAYVLMRNRAAQSRQLLAEQELDEIADDRMALVSGISLDPEAAIGVTKKLPPK
WVDGVEQIQFDITRIKQKMKELAGLHDKYLNRPTLDDSSEEEHAIEITTQEITQMFHRCQ
RAVQSLQSKWRSCTEQEERVLRNVVTSLAQALQDLSTNFRHAQSNYLKRLKNREERSKHF
FDTSVPLMDDGEDNNLYDKGFTHDQLLLVEENTLMVEEREKEIRQIVQSISDLNEIFREL
ASMIVEQGTILDRIDYNVEQSCIKTEEGLQQLQKAEQYQKKNRKMLVILILFVIVVVLIV
VLIGVKSR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgcagtctgaccgatgcctatgtgctgatgcggaaccgagcggcccagagc
cggcagctgctggccgagcaagagttggatgagatagctgatgatcgtatggcattggtg
tctgggatcagcctggatccagaagctgccattggtgtaactaagaaactgcctccaaaa
tgggtggatggagtggaacagattcagtttgacatcaccagaataaaacagaagatgaag
gagctggctggtttacatgacaagtatttgaacaggccaacactggatgacagcagtgag
gaggagcatgcaatagaaatcaccacgcaggaaataacacagatgttccacaggtgtcag
cgagcggtacagagcctgcaaagcaaatggcgcagttgtacagagcaggaagaacgggtc
cttcgaaatgtcgtcacttctctggcacaagcccttcaagatctgtcaaccaactttcgg
catgctcagtccaactatctcaaacgtttgaagaatcgagaggaaaggtccaaacacttt
tttgatacatcagtgccactaatggatgatggtgaagacaacaacctttatgacaaaggt
tttacacacgatcagctgctcctggtggaagagaacactttgatggtggaagagcgagaa
aaggagatccgacagattgtgcagtcaatatcggacttgaatgaaattttcagagagctg
gccagcatgatcgtggagcagggaactatcttggaccgaattgattataatgtggaacag
tcctgtattaaaacggaagagggcttgcagcagttacagaaggcagagcaataccaaaag
aagaatcgaaagatgttggtcattctgatcttgtttgtgatcgtagttgttctcattgtc
gtgttaataggtgtcaaatcaaggtga
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integrated database retrieval system