Rhincodon typus (whale shark): 109922407
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Entry
109922407 CDS
T06055
Symbol
lrrc7
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 7
KO
K24055
leucine-rich repeat-containing protein 7
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109922407 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
109922407 (lrrc7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
PDZ_6
PDZ_2
LRR_EndoS
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
109922407
NCBI-ProteinID:
XP_048458039
LinkDB
All DBs
Position
10:33437832..33694142
Genome browser
AA seq
1394 aa
AA seq
DB search
MTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQHVPKEIFNFERSLEELYLDANQIEE
LPKQLFNCQALRKLSVPDNDLSNLPTTIASLVNLRELDISKNGIQDFPENIKCCKYLSVI
EASVNPISKXVMGFTRLFSMSVSFLSESFLIHVPIAFSKLTRLNTLNFKKLNTFDQIKMI
RXSMHRLTQIDRLDLGSNEFTELPEVLEQLQSLKELWMDNNSIQTLPGPLAKLKHLTYLD
MSKNRIETIESDISGCEGLEDLLLSSNLLQQLPDTIGILKKLTTLKVDDNQLNVLPNAIG
GLSVLEEFDCSCNELESLPHTIGYLHNLRTFAADENFLTELPREIGSCKNVTVMSLRSNK
LERLPEEIGQMQKLKVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIPLQTESHPE
TKQRVLTNYMFPQQPRNDEEFPSDSDSFNPTLWEEQRQQRMQVAFEFEEKKEEEDDSGKV
EINLKRYPTPYPEDLKNMVKSVQHLVGKHSQEGSEENSTGATNIEHSAKDKYEHKWPISA
KEVTLERSLGESPNDLRMGELRPTLSETPLFKPKVVLLGKEKKESTDDSEGDRINNSGSS
ASYSDYSPSQGSSASSGVPIKVSTLQTAVKDGVAASSWGNRLTQTFQQNIEAKPLLSQRE
AASTASLQQRTERRPVNETFSDKWNDNSHYDNTGFVAEESTSVLENPGANPLISTKSRST
SAHGRRPLMRQDRIIGMPLELEQSMHTVHSIRSTPETEVPPSNPWQNWTRTPSPFEDRTA
FPSKLDSTPFSSPIPDRKDPEQQSVHGITELPSPFTSGAPWSFLNSRESNLNQGHADKFS
HICRPESAKSAIIASKSTERLAPMMRSVRAGQFKKSQSIDEIDIGAFKIYNIPLDSYGSS
SENPGSIDIPEQMPTQEQGMSRSLSAPMLDEDLSETYGSGKISQRVPITKKVYHFDQSFN
PQGTINVKPERRVTTSFTHNVDYGVHQNKQVSKDLISPRSFRGYQPVEHMYSFSQPSVND
EPANPRFSSQGERAGYLRRGDSLATSTEMVLHRRVNEAPELPQSDRYVRTHFRGVLEHQN
SASLVESQYLKRNGRYEEDYSTFHDTKNQGRNFQDKPLTQRRPLSARSYSTESYGFSQTR
PVSARPTMAALLEKLPSDYNISNYNEKPSESNDIRIRSSQLKGDENSAKIPLDWRQQLLR
HIEAKRLDRLPESLPNGLNYPQAGSHPHQGQSALGSSPQSLQHRTREQQYEGAVSKVTLQ
QYQKPLQIAISSSQNIASPRATQPSRCLTSIKPQKSTESYQEQFCVRIEKNPGLGFSISG
GISGQGNPFKPSDMGIFVTRVQPDGPASNLLQPGDKILKANGHNFIHMEHEKAVSLLKSF
QNTVDLIIQREIPT
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaagagaaaacttattggccgcctggtgccctgccgatgtttccggggtgaa
gaagaggtcatctctgttttggattattcccactgcagccttcaacatgtaccaaaggag
attttcaattttgaacgatctttggaagagctctacttagatgctaatcaaatagaggag
ctccccaagcaattattcaactgccaagctctccgtaaactaagtgttccagacaatgat
ctttctaatctgcccaccaccattgccagcctggtgaacctaagagaactagacatcagc
aaaaatggtattcaagatttcccagaaaatattaagtgctgtaaatacttatctgttatt
gaagccagtgttaatcccatttccaagtgagttatgggctttaccaggctgttttccatg
tcagtcagtttcctgtcggagagttttcttatccatgtcccaattgcattctcaaaattg
actagattaaatactcttaattttaaaaaattgaatacttttgatcaaatcaaaatgatt
cgatgatcaatgcacagactgacacagatagatcgattggatctgggcagtaatgaattc
acggagctgcctgaagtcctggaacagctacagagcctgaaggaactctggatggataat
aactcaatacagacattgcctgggcctctagcaaagttgaaacatctgacatacttggat
atgtcaaagaatagaatagaaacgattgagtcagatatttctggatgcgaaggcctggag
gacctcctgctttcatccaatctgctgcaacagctgcccgacaccataggaatattgaaa
aaactcacaacattgaaggtggatgacaaccagctgaatgttttacccaatgcaattgga
ggtctttctgtcttggaggagtttgactgtagttgtaatgaacttgagtctcttcctcac
accattggatatctacataacctccgaacctttgcagctgatgaaaacttcttgacagaa
ctgcccagagagattggaagttgtaaaaatgtaactgtcatgtctttacgatcaaacaaa
ctggaacggttgcctgaagagattggacagatgcagaaactgaaagtgttaaatttaagt
gataacaggttgaagaatttgccattcagttttactaagcttaaagagctggcagcacta
tggctatctgataatcagtccaaggctctaatccctctgcaaactgagtctcatccagaa
acaaaacagagagtgttgacaaactatatgtttccacagcagccacgcaacgatgaagaa
ttcccttcggacagtgatagcttcaatccaactttgtgggaagaacaaaggcaacaacgg
atgcaggttgcttttgagtttgaagagaaaaaggaagaagaagacgattctgggaaagtt
gaaataaaccttaagcgttatcctaccccttacccagaagatctgaaaaatatggtgaag
tctgttcagcatttggtgggaaaacatagtcaagaaggatctgaagaaaactccacaggc
gccacgaatatagaacattctgcaaaagataaatatgagcataagtggcctatatctgca
aaggaagttacgcttgagagatcgttaggagagtcgccaaatgatctcagaatgggagaa
ctgcggcctactcttagtgaaactccactattcaaacccaaagtcgtcttgttgggtaaa
gagaagaaagaatcaacagatgactcagaaggtgacagaatcaacaacagtggctcttcg
gctagctactcagactactcgccttctcaggggtcttctgcttcttctggagtacctatt
aaagtcagcacattgcagactgcagtcaaagacggtgtggcagcttcctcatggggaaac
aggttaacacagacatttcaacaaaacattgaagcaaaacccttactcagccagagggag
gcagcatcgacagcaagtctacaacaacgtactgagaggcgtcccgtgaatgaaactttt
tctgataagtggaatgataattcacattatgataatacaggctttgttgcagaagaaagc
acttcagtcttagaaaatccaggtgccaaccccttaataagcacaaaatcaaggagcacg
tctgcccatgggcgtaggccattaatgagacaggacagaattataggaatgccactggaa
ttagaacagtcaatgcataccgtacatagtatcaggagtactccagaaactgaagtgcct
ccaagtaatccttggcaaaactggactaggacgcctagtccatttgaggataggacagca
tttccatcaaagttggatagtacccctttcagcagccctattcctgataggaaagatcca
gaacaacagtcagtgcatggaattaccgaactgcccagcccttttacatcaggtgctcca
tggagttttctcaactctagggaatccaatttaaatcaaggtcatgcagataaattctca
cacatctgcagacccgagtccgccaagagtgccattatcgccagtaaaagtacagaaaga
cttgcaccaatgatgagatcggttagagctggccagtttaagaaatcccaaagcattgat
gaaattgacattggggccttcaaaatttataacataccactggacagttatggctccagc
tcagaaaaccccggtagcattgatataccggaacaaatgccaacacaagaacaaggtatg
tcacgcagcctttctgctccaatgttggatgaagatttatcagaaacatatggaagtgga
aagatatctcaaagggttccaattacaaaaaaagtgtaccatttcgaccaaagtttcaat
cctcaaggtacaataaatgttaaacctgagagacgagtaaccacttcttttacacataat
gttgactatggtgtccatcaaaacaaacaggtttcaaaagatctcattagtccacgctca
ttcagaggttatcaacctgtggaacatatgtattcattctcccaaccttcagtgaatgat
gaaccagctaatcctcggttttcaagtcaaggggagagggctggatacttgagaagggga
gactccttagcaacctccacagaaatggtgttgcatcgaagggtaaatgaagctccagag
ctgccacaaagtgacagatatgtcaggacgcacttcagaggagttttagaacaccagaac
agtgcatcattggttgaatcacagtatctcaaaaggaatggaagatatgaagaagattat
tcaacattccatgacacaaaaaatcagggtaggaatttccaagataaacctctaactcag
aggagacctttgtctgcaagaagctacagtacagaaagctatgggttttctcaaaccaga
ccagtttcagcaaggcctaccatggcagctctattagaaaagttaccttcagattataac
atcagtaactacaatgaaaagccttcagagagcaatgatataaggatcaggtcttcacag
ttgaaaggagatgagaactctgctaaaatacctctagactggagacaacaactgctcagg
catatagaagctaaaaggttagataggcttcctgaatctttgcctaatgggctgaattac
ccacaggcaggtagccaccctcaccaagggcaaagtgcactagggtcttcaccacaaagc
ctgcagcatcgaaccagggaacagcaatatgaaggagctgtatcgaaggtgactcttcag
cagtatcagaagcctttgcagattgccatttcatcttcacagaacattgccagtcctcga
gcaactcaacccagcaggtgtctgacaagtattaaaccacaaaagagcacagaaagctac
caggaacagttttgtgtgagaatagagaagaaccctggtcttggcttcagtataagtggc
ggaataagtggacaagggaatccattcaagccttcagatatgggcatcttcgttactaga
gtacaacctgatggaccagcatccaatctgttacagcctggagacaagatccttaaggcc
aatggacacaactttatacacatggaacatgagaaggcagtgtcacttcttaaaagtttc
cagaacacagtggatctgataatccaacgtgagattccaacctag
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