Rhincodon typus (whale shark): 109922438
Help
Entry
109922438 CDS
T06055
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
109922438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
109922438
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Vision
Opsin
109922438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
TAS2R
Motif
Other DBs
NCBI-GeneID:
109922438
NCBI-ProteinID:
XP_048462427
UniProt:
A0A7T8R2L6
LinkDB
All DBs
Position
16:61095227..61116505
Genome browser
AA seq
354 aa
AA seq
DB search
MNGTEGENFYIPMSNKTGVVRSPFEYPQYYLAEPWKFSLLAAYMFFLIITGFPINFLTLY
VTIQHKKLRQPLNYILLNLAVSDLFMVLGGFTTAIITAMNGYFIFGPAGCNFEGFFATLG
GEISLWSLVVLAIERYVVVCKPMSNFRFGSQHAIMGVTFTWIMALACAFPPLVGWSRFIP
EGMQCSCGIDYYTLKPEVYNESFVIYMFVVHFSIPLTVIFFCYGRLVCTVKEAAAQQQES
ETTQRAEREVTRMVIIMVFAFLICWLPYASVAIYIFTNQGSEFGPVFMTIPAFFAKSSAL
YNPLIYILMNKQFRNCMITTICCGKNPFEEDESASVSASKTEASSVSSSQVAPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcaccgaaggagagaacttctatatacccatgtccaacaagacaggtgtggtc
aggagcccattcgaatacccgcagtactacctggctgagccttggaaattctcactgctg
gcagcctacatgttcttcctcattataacagggttccccatcaatttcctcaccctgtac
gtcaccatccaacacaagaaacttcggcagccccttaactatatcctcctcaacctggct
gtttctgatctcttcatggtccttggtggattcactaccgccatcatcaccgcaatgaat
ggctatttcatcttcggaccagctggttgtaactttgaaggcttctttgccacacttgga
ggtgagatctctctctggtcgcttgtggttcttgctattgaacgatacgtggttgtctgt
aaacccatgagcaacttcagatttggcagtcaacacgccattatgggcgtgaccttcaca
tggatcatggcattggcttgtgccttccccccactagtcggatggtccaggttcatcccc
gagggaatgcagtgctcatgtggaatcgattactacaccttgaagcctgaagtgtacaat
gaatcctttgtcatctacatgtttgttgtacatttcagcatccccctgactgttatcttc
ttttgctatggccgcctcgtctgcacagtcaaagaggccgcagcccagcaacaggaatca
gaaaccacccagagagctgagcgggaggtcactcgaatggttatcatcatggtgtttgct
ttcctcatctgttggttgccgtacgcctctgtggcaatctacatcttcaccaatcaaggc
agcgaattcgggccagtcttcatgaccatcccagcattctttgccaaaagctcagctctg
tacaaccctctcatttacatcctgatgaacaaacagttccgtaactgtatgatcaccacg
atctgctgtggcaagaatccattcgaagaggatgagtctgcctcagttagtgccagtaag
actgaggcttcatccgtctcctccagccaggtggcccctgcgtaa
DBGET
integrated database retrieval system