Rhincodon typus (whale shark): 109922452
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Entry
109922452 CDS
T06055
Name
(RefSeq) cystathionine gamma-lyase isoform X1
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00260
Glycine, serine and threonine metabolism
rtp00270
Cysteine and methionine metabolism
rtp00450
Selenocompound metabolism
rtp00670
One carbon pool by folate
rtp01100
Metabolic pathways
rtp01230
Biosynthesis of amino acids
Module
rtp_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109922452
00270 Cysteine and methionine metabolism
109922452
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
109922452
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109922452
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109922452
Enzymes [BR:
rtp01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
109922452
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109922452
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
GDC-P
Motif
Other DBs
NCBI-GeneID:
109922452
NCBI-ProteinID:
XP_020378094
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All DBs
Position
10:33913542..33959394
Genome browser
AA seq
417 aa
AA seq
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MSAGCKNSELKGEFLPPFEHFSTQALHAGQDPEQWKSMAVVPPISLSTTFKQSAPGQHAG
FEYSRSGNPTRNCLEKAIAAVDGAKYSLAFASGLSTTMTIVHLLKSGDNIICVNDVYGGT
NRYFRRVASEMGLEISFIDCTSLECLDAAIKPNTKLVWIETPTNPMMNVIDIKGCAETVH
KHGDIILVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLASMNRDDLHEKLK
FLQNAIGAVPSPFDCYMCNRGLKTLALRMKQHFKNALVVAQFLEADPRVEKVLFPGLPSH
PQYNLTKQQCTGSSGMIAFVIKGDLEHAITFLKNLKLFALAESLGGYESLAEHPAIMTHA
SVPEEDRDALGISDTLIRISVGLEDLVDIIEDLHQALKAAHPNVVIPADQINGYLYN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctggttgcaagaatagcgagttgaagggtgaatttctgccaccttttgaacat
ttttctacccaggcacttcatgcggggcaggatccggaacagtggaagtcaatggcagtg
gtgcctccaatatcgctatctacaacgtttaaacaaagtgctcctgggcagcatgcgggc
tttgaatatagtcgcagtggaaatcctacacggaattgtttggagaaagctattgcagca
gttgatggagcaaaatatagtttagcgtttgcatctggtttgtcaactacaatgacgatt
gtgcacctgttgaaatctggtgataacattatttgtgtgaatgatgtatatggaggtacc
aaccgatacttccgcagggttgcatccgaaatgggtttggaaatctctttcattgactgc
acatcattggaatgtctggatgcagccattaagccaaacaccaagcttgtctggattgag
acccctactaaccctatgatgaatgttattgacatcaagggttgtgcagaaactgtacac
aaacatggagatatcattctggtggtggataacaccttcatgtcagcctatttccagcgt
cctttggcccttggtgctgacatctgtatgtactctgcaacaaagtacatgaacggtcac
agtgatgtagtcatgggattggcttcaatgaatcgtgatgacctccatgagaagctgaaa
ttcttgcaaaatgctattggtgcagttccatctccatttgactgctacatgtgtaatcgt
gggttgaagactttggcccttcgaatgaaacaacacttcaagaatgcattggttgtagcc
cagtttttggaggcggatcctcgagtagaaaaagttcttttcccaggtctcccttctcat
ccacaatacaatctgacgaagcaacagtgcaccggaagttcgggtatgatagctttcgta
attaaaggagatttggaacatgccataacattccttaaaaacttaaaactgtttgccctt
gctgagagtttgggaggatatgaaagcctggcagagcatccggccattatgacacatgct
tctgtcccagaggaggatcgagatgcattgggaataagtgacacgctaatcagaatatct
gttggcttggaagacctagtagacattattgaggatctacatcaagcattaaaagctgca
catccaaatgtggtgatacctgctgaccaaatcaacggatacctttacaattaa
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