Rhincodon typus (whale shark): 109922496
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Entry
109922496 CDS
T06055
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04136
Autophagy - other
rtp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109922496
04136 Autophagy - other
109922496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109922496
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109922496
Membrane trafficking [BR:
rtp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109922496
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109922496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
109922496
NCBI-ProteinID:
XP_048456009
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All DBs
Position
8:1820319..1917996
Genome browser
AA seq
1900 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLDHFLEEKLSLEQLSVDLYQGTGSLAQVPLDKSSLNEIL
DSLDAPLEIVEGFIQNISVSIPWASLLQENCAVGVQGLEMVFRPRPRIVSGTEPMYWSSF
MTDSMQLAKECLSQRLTDDQADGLQPFEGLEKFAETIETVLRRVKLTFLETVLRIEHIPE
NSKTGIALEIRIQRIEYRDESANESPDISIHHPTAFAQKNLQLRGISFSWHEFPESAKTS
PRTSPMQEMEPKLSPSWNPKIVSEPHPQFTRKASDAVLFDPVQIGSCEGKVELKLTLKQN
EALPMAKLDVEGHIEAVNFFLSPRQVHLLLDMLSTILLPGCAEATTVPSKSRRNRPMQQE
DQYLIQMELNRFMQKEKGSPGISAEQSYYETETVRTTSSRAEDDVFFSMADMEMSNSVAS
LPPLGEPTIDMELSLSSTHANSTGSSPQSTPGFSTSWDDYLDHSGQGGRAVQESAFNSKE
LPIIQRPLRPSSLHSKSHSIDESRPQVVIRLTIGSLSMSVLHIDPLPPPENPLHLDPLSR
MASHFFEQLKTLNLSQFPAGEFNAFRPKFAAACPHDHLRLFATGIKLNYEQRLGTSSRSL
NTDVCINWMELLECLFPMDSVTVVPQYTELITFQSVSETGAHPTPSVQLHYKHIDRRGIQ
GSQGRLTAVPQKAELQIELGLIQSELDISIVDRLNSLLQPPKLATTEMMASHMYTSFNKH
ISLQRAFTEVFRDDSASPANQRTSVQLTTPLFKLAVRFPIPDLRSDQERGPWFKKSLQKE
VLHLEFSEAEFKTEFFGSLSHEQLKLELTFKELLGKFQEDPATPPFTFFKVSHGADGDMS
TFDSGKFDWPRVVLKVNPTVVHSILERITTEEEEPGSHLLEDEEGGSHSLKDVCDLGKQE
PSPFSSRRVMYENEEMVMPGDQFEMGQFQDKTISTSHYVLELMLPNVNLTLPNKAFYEKV
YNRINNDLLLWEPAAPSPVETVENITYGVGLSVASQLINAFNKDSLPPLKSTLLQDDDES
GSDEETLPFCPSTDPAHRSRRKKKVEQQNKNCQSFLSILLNVSHGLVSIYTDTKSEDGTL
LAGQHGEFWLEIENASLFTVGKYQGCDGQHYFCLQTSKVFLCHQGLSIILPIYICFHEGA
DSHWGTRSCSSPEGVVEDICAPGDIKLPSKSQPSWVEPTIYKSEEGALTKQAAASVGVGV
ESPNMLSIAVKVHHNKNESNMKEILVAIGLRGATLQHRNVPPGRSWYEQFVDFLNIADEP
VLGYAHPANETTFHLHLWSCALDYRPQYLPVRALVTVETFTISSNIVLDKYCSTLRIIID
DAALYLSEKCNLSAVNLKKDYVRVLDMGLLEFRITASKQTAEAELFQPRFELQCTSDVIH
IRTCSDSCAALMNLIQYVASYGDLHPPCKFQAAPGTAAQRSRAGSGDSAPCRTSGLAEAE
QKLLRDLMIDAMEEMDIPPSSPPTTQASQQSNGIYDDLIQEREPTRSDLFLFPDESGSSS
QEQSPSSTMIFPEHHAAYPSLPSEQPESEDFCILEAPKMAIMRETEPVVRMLNSGPILIK
DDYFTQPVKKLDTGKSPLHLPVPETRYVVKEISVVWHLYGGRDFGTALSTRSPMKSITSS
QGSPSQSSSRHSRSARRIQGGPGRNHDVLMEIQFSKVKFQHEVYPQTGYDEDSSSTEHPI
SRQVFIVQDLEIRDRLATSQMNKFLYLYSSKEFPRKAHSNMLTIKALHVRPDSTQMPREC
CLRITLMPLRLNIDQDALFFLKDYFTSLAAEVELLIPPDPVQEVRKTPGTDISSSLSKNG
TSATDHGPIITVPGHSKHRLDPLTAASRVPVSEPEGVSVPFGDQPIFFREFRFTSEVPIR
LDYHGKHMSMDQGTLAGILIGLAQLNCSELKLKRLCYRHG
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgccttggcctttctctgaatcgattaagaaacgggcatgcaggtacctgctgcaccgg
tatttggaccacttcctggaggagaagttgagtctggagcagctgagtgtggatctctac
cagggaacaggctcccttgcacaggttccactggacaaatcgtccttgaacgaaatcttg
gattcacttgatgcgcctttggaaatagttgaaggatttatccaaaacatttctgtttca
ataccatgggcatcacttctgcaggaaaactgtgcagtgggggtacagggattggagatg
gtctttcgacccaggcctcggatagtgtctggcacggagccaatgtactggtccagcttt
atgacggatagtatgcagctggccaaagagtgcctgagtcagaggttgacggatgatcaa
gctgacggactacagccatttgaggggcttgagaagtttgcagaaaccatcgaaacagtt
ttaagaagagtcaagcttacgtttctagaaactgtcctcaggattgagcatatcccagag
aactcaaaaactgggattgcccttgagattcgaatacagagaattgaataccgtgatgaa
tctgcaaatgagagtccagatattagcattcatcatcccacagcttttgcccaaaagaat
ctgcagctgcgtggaatctcattttcttggcatgaattccctgaaagtgcgaaaacatca
cccagaacttcaccaatgcaggaaatggaaccaaagctctctccaagttggaacccaaaa
atagtttcagagcctcacccccaattcacaaggaaagcatctgatgctgttctctttgat
ccagtccagattgggagttgtgaagggaaagtggaactaaaactcacattgaaacagaat
gaagcacttccaatggccaagctggacgtggagggacatatagaggctgtcaacttcttc
ctatctccacgacaggttcacctcctgttggatatgctgagcaccattctactgccaggg
tgtgccgaggcaacaactgttccatcaaagagccggagaaatcggccaatgcagcaggaa
gatcagtatctgattcaaatggaactcaaccgattcatgcagaaggaaaagggttcccct
ggcatctcagcagagcaaagctattatgagacagaaaccgttcgaacaacttcaagcaga
gcagaagatgatgtcttcttctcaatggcagacatggaaatgtcaaacagtgtggcatct
cttccaccccttggagagccaacaattgatatggagttatcgttgagtagcacacatgcc
aactcaactggcagttctccacagagcacaccagggttttccacatcatgggacgattac
ctggatcactctgggcaaggtggccgggcggtacaggagtcagcgtttaactcgaaagag
ttacccataatacagagacctctccgacccagcagtttacattccaaatcacattccatt
gatgaatccagacctcaggttgttatccggctgactattggcagtctatccatgtcagtg
ctgcacattgatccactgccgccacctgagaacccgttgcaccttgatcctctgagcagg
atggcatcccatttctttgagcagttgaagaccctcaatctgtctcagtttccagcaggg
gaattcaatgccttccgacccaagtttgctgcagcttgtccccatgaccatctcaggctc
tttgcaactggcatcaagctgaactatgaacaacgacttggcaccagttctcgaagctta
aacacagatgtctgcattaactggatggaactgttggaatgtctcttccctatggattca
gtgactgttgtaccacaatatacagagctgatcacttttcagtcagtgagtgagacagga
gctcatcccacaccttcagtacagcttcactataagcacatcgaccgaagaggaattcag
ggcagccaagggagactgacagcggtgccacaaaaggcagagctgcagattgagctaggc
ctgattcagtcagaattggacatcagcattgtggacaggcttaactcgttactgcagcct
ccaaaacttgcaacaacagaaatgatggcatcacacatgtacacctcctttaacaaacac
atcagtctgcagagagccttcactgaggttttccgtgacgattctgcctcgcctgctaac
cagcggacgtctgtacagctcaccacacctttgttcaaactggccgtccgcttccctatc
ccagaccttcgatctgaccaggaaagaggaccctggttcaagaaatcactacaaaaggag
gttctgcacttggaattcagcgaggcagaatttaagactgaattctttgggagtttatcc
catgaacagctcaaattggagctcactttcaaagaactgcttggtaaattccaggaagat
cctgcgacaccaccgttcacattttttaaagtgtcacatggtgctgatggagacatgtca
actttcgacagcgggaagtttgattggccaagggttgtattgaaagtgaatccaacagtg
gtgcattccatcttggagcgaataacgacagaggaggaggaacctgggagtcacttactt
gaagatgaagaaggtggcagccactccctgaaggatgtttgtgatttgggaaagcaagaa
ccctcgcctttctcctcgcgaagagtcatgtatgaaaatgaggagatggtgatgccaggg
gatcagttcgaaatgggtcaattccaggataaaaccataagcacgtcccactacgtactg
gaactgatgttacctaatgtcaacctcactctgccaaacaaagcgttctatgagaaggtg
tataacagaataaataatgatttgttactatgggaacctgctgccccatctcctgttgag
actgttgaaaacattacttacggggttggactgtctgtagccagtcagttaatcaacgcg
ttcaacaaagacagtctccctccactcaagtcgacactcctccaggacgatgacgagagt
ggctctgatgaggagacgctaccattctgccctagtactgaccctgcccaccgttcacgt
cgtaaaaagaaagttgaacaacagaacaagaattgccagagctttctgtcgatccttctc
aatgtgtctcatgggcttgtcagcatatacacagataccaagagtgaagatggcacgctg
ttagctgggcagcatggtgaattctggctggagattgaaaacgcaagcttgttcactgtg
gggaagtatcaaggctgtgatggtcagcattatttctgtctccaaacaagcaaagtcttc
ctttgtcaccaaggtctttccatcatcctaccaatttacatctgctttcatgaaggtgct
gactctcactggggtacacggtcctgctcctctcctgaaggagtagttgaggatatctgt
gcccctggtgatataaagctccccagcaagtctcagccttcatgggttgaacctaccata
tacaagtctgaggagggtgctctgaccaagcaggctgctgcttcagtgggagttggtgta
gaaagtccaaacatgctctccattgcagtaaaagtacatcacaacaaaaacgagagcaac
atgaaggagatcctggtggctatcgggttgcgtggggccaccctccagcatcgcaatgtg
cccccagggcgaagctggtacgagcagtttgtggatttcctgaatattgctgatgaacca
gttttgggttatgcccacccagcaaatgaaaccaccttccacctgcatctctggagctgt
gccctggattacaggccacagtatttaccagttcgagcactagtcactgttgaaaccttc
acaatatctagtaacattgttctggacaagtattgctccacactcagaattattatcgat
gatgctgcattgtacttgtctgaaaaatgtaatctatctgcagtaaatttaaagaaagat
tatgtgcgtgtcttggacatggggttactggagtttcgaataactgcgtcaaagcagact
gcagaagcagagctgtttcagccccggtttgaacttcaatgcactagtgacgtcatccat
atccggacctgttctgattcttgcgctgccctcatgaatctcatccagtatgtggcgagt
tatggagacctacatcctccctgcaaattccaggctgctccaggaacagcagctcagaga
agcagggctggttcaggtgacagtgctccttgccgaacctccggccttgctgaagccgag
cagaagctcctacgggacctgatgattgatgcgatggaagagatggatatcccaccatct
tcacctcctactactcaagcctcgcagcagtcaaatgggatctatgatgacctcattcaa
gagcgcgagccaactcggtctgacctgttcctcttccccgatgagagtggaagttcttca
caggagcagagcccaagttccaccatgatctttcctgagcatcatgcagcctacccctcc
ttgcccagcgagcaacccgagagtgaggacttctgtatcctagaagcaccaaagatggcg
atcatgagagagactgagcctgtagtgaggatgctgaattctggaccgatcctcatcaaa
gatgactacttcacacaaccggtcaagaagctggacactggcaaatcaccactgcacctt
ccagtccctgagacccgatatgtagtgaaggagatctcagttgtctggcacctgtatgga
ggaagggactttggaactgccctctctacacgttctcccatgaaaagcataacctcctct
caaggctcgccgtctcagtcatcctcccgccacagccgttctgcccgtcgtattcagggt
ggacctgggaggaaccatgatgtgctgatggagattcagttcagcaaggtgaaatttcag
cacgaagtgtaccctcagacaggttatgatgaagattcaagttcaacagagcatcccatt
tcacgacaagtcttcatcgttcaagatctcgagatcagagaccgtcttgccacatcccag
atgaacaaattcctctacttgtattcgagcaaagagttcccaagaaaggctcattctaat
atgctaactattaaggcattacacgtgagaccagattccactcagatgcctcgtgagtgc
tgtttacgcatcacactaatgccccttcgactaaacatcgatcaggatgcattatttttc
ttgaaggactattttaccagcctggctgccgaggtagagctgttaattcctccagatcct
gtacaagaggtgagaaaaactcctggaacagacatcagcagtagcctttccaaaaatgga
accagtgctacagaccatggacccattattactgtaccaggtcacagcaaacacaggctg
gatcctttgactgctgcgagcagagtgccagtcagtgagccagagggtgtctcagtgcca
ttcggggaccagccaatcttcttccgggaatttcgcttcacgtcagaggtgccaatccga
ctggattatcatggcaagcacatgtccatggatcaaggtaccttagcagggatcctaatt
ggactggctcaactgaactgctcagagttgaagttgaaaaggttgtgttacagacatggg
taa
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