Rhincodon typus (whale shark): 109922515
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Entry
109922515 CDS
T06055
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109922515 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109922515 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109922515 (srsf2a)
Spliceosome [BR:
rtp03041
]
Common components
Common spliceosomal components
SR proteins
109922515 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
RRM_PARP14_3
RRM_8
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
109922515
NCBI-ProteinID:
XP_048448420
LinkDB
All DBs
Position
Unknown
AA seq
213 aa
AA seq
DB search
MSYGRMPPDIEGMTSLKVDNLTYRTSPETLKRVFEKYGKVGDVYIPRDRFTRESRGFAFV
RFHDKRDAEDAIDAMDGAMLDGRELRVQMARYGRPAESHRRGGSSRRYGGAYGRRSRSPR
RRRRSRTRSRSRTRSRSRYSRSRSRTYSRSRSHSKSRSVERSRSKSKSKSKSRSRSVSRS
RSGSQMSRGSKSKSRSKTPIYSRSPQKDGIESP
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggccgaatgccccccgatatcgaagggatgacttcactgaaggtggacaac
ctaacttaccgcacgtcgcccgagacgttgaagcgcgtgttcgagaagtacggcaaagtg
ggcgacgtttacatcccccgagaccgcttcacccgggagagccgcggcttcgccttcgtc
cggttccacgacaagagggacgccgaggatgccatcgacgccatggacggcgcgatgctg
gacggcagggaactgagggtgcaaatggcgcgctatggccgcccggccgagtcacaccgc
cgaggaggctcgtcccgacgttacggtggcgcctacggcaggagaagccgcagtcctaga
agacgacgtcgatcccgtacaaggtccagaagtcgaactagatcaagatcccgctacagc
aggtccaggtctcgcacctattctcgatctagatctcattcaaaatcgaggtctgttgaa
agatcaagatcgaagtcaaaatctaaatcaaagtcaaggtctcggtctgtatcaagatct
aggagtggatcgcaaatgtctcgaggatcaaagtcaaaatcccggtctaaaacccccata
tattcaagatctccacagaaagatggaattgaatcaccgtaa
DBGET
integrated database retrieval system
