Rhincodon typus (whale shark): 109922676
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Entry
109922676 CDS
T06055
Name
(RefSeq) keratin, type I cytoskeletal 18-like isoform X1
KO
K07604
type I keratin, acidic
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109922676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109922676
04147 Exosome [BR:
rtp04147
]
109922676
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
109922676
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
109922676
Exosomal proteins of other body fluids (saliva and urine)
109922676
Exosomal proteins of colorectal cancer cells
109922676
Exosomal proteins of melanoma cells
109922676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ATG16
TPR_MLP1_2
Lectin_N
EzrA
DUF3450
CCDC39
FKBP15
DUF1664
Plectin_PPL
ABC_tran_CTD
DUF6054
GAS
DUF7310
NPV_P10
DUF4407
LemA
DUF5660
Motif
Other DBs
NCBI-GeneID:
109922676
NCBI-ProteinID:
XP_020378305
LinkDB
All DBs
Position
7:96532577..96547491
Genome browser
AA seq
420 aa
AA seq
DB search
MNYNKTPFSRTASSSSMVIGLTPRRASNARSLQGDASRSVRVASYSPGSITNLSRIAVPN
TFNQQDELQGLNKRLAIYLNKVKSLESTNKELQGKIHAHLAQKGNLARDWSSYEKPVVDI
CKQVQETNMDNAGLTLQLDNCELASDDFKVKWQSELDLRQSVEQDLNGLRKILDDTNVGR
MQLESQIEALNEELSYLRKNHQEEVDELKKQIANSSVSVEVENSDDEDLGKIMCSIREEY
QALADQNRKDAEECYRKKFDAASLEASKNNEALQATKNELTNIRRQIKNLEVEQRSLMAM
ISSLEDTLEDTDQRLAAELQALNQTIQHLEEQLADSHSRLKAQNLEYQNLLNTKMRLQAE
IDTYRRLLEVEGHSQTDHFRSFPDSSTGDKKTTKKVIIISQKVINGKVVSEKQESKEILQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaactacaacaagacgccgttctcccgtacagccagctccagcagcatggtgatcggg
ttaacccccaggagagccagcaatgcccgcagcctgcagggtgatgcgagcaggagcgtg
agagtagcttcttacagcccgggcagtataaccaacctgagcaggattgcagtccccaac
accttcaaccagcaggatgagctgcagggactgaataagcgactggctatttacctgaac
aaggtgaagagcttggaaagtacgaacaaggagttgcagggcaagatccatgctcacctg
gctcagaaaggtaacctggctcgggactggagctcttacgagaagccagtggtggatatc
tgcaaacaggttcaggaaacaaacatggacaacgctggtctgactctgcagctggacaac
tgcgaactggcctctgacgatttcaaagtgaagtggcaatcagagttggacctgcggcaa
tcagtggaacaggaccttaacgggctgcggaaaatccttgatgacaccaatgtgggccgc
atgcagctggagtcccagattgaggccttgaatgaggagctgagttatctccggaagaac
caccaggaggaagtggatgagctcaaaaagcaaattgcaaattccagtgtctcagtggaa
gttgaaaattccgacgacgaggatcttgggaaaattatgtgcagcatccgtgaggaatat
caggccctggctgatcagaacagaaaggatgcagaggaatgttacagaaagaagtttgat
gctgcttctcttgaagcttcaaagaataacgaagctcttcaagcaacaaagaatgagctg
accaatatccggcgccagatcaaaaacctggaggttgagcaacgctccttgatggccatg
atcagttcccttgaagacactttggaggacactgatcagcgattggctgcagagctacaa
gccctgaaccagaccatccagcacctggaggagcagctcgctgatagccacagcagactg
aaagctcagaatttggagtaccagaacctcctcaacaccaagatgagactgcaagctgag
attgacacctatcgtcgtctgctggaagttgaaggacatagtcaaacagatcatttcaga
agttttcctgattcaagcactggagacaagaaaaccactaagaaagtcatcatcatttcc
cagaaggtcataaatgggaaagtcgtttcggagaaacaggaatccaaagaaattctgcag
taa
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