Rhincodon typus (whale shark): 109922748 Help Entry 109922748         CDS       T06055                                  Name (RefSeq) syndecan-1-like   KO K06257   syndecan 1 Organism rtp  Rhincodon typus (whale shark) Pathway rtp04512   ECM-receptor interaction rtp04514   Cell adhesion molecule (CAM) interaction rtp04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:rtp00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109922748    04514 Cell adhesion molecule (CAM) interaction     109922748  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     109922748  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rtp04131]     109922748   09183 Protein families: signaling and cellular processes    04090 CD molecules [BR:rtp04090]     109922748    00535 Proteoglycans [BR:rtp00535]     109922748 Membrane trafficking [BR:rtp04131]  Exocytosis   Calcium ion-dependent exocytosis    Acrosomal exocytosis proteins     109922748 CD molecules [BR:rtp04090]  Proteins   109922748 Proteoglycans [BR:rtp00535]  Cell surface proteoglycans   Syndecan family (transmembrane HSPG)    109922748 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Syndecan LXN DUF2613 Motif Other DBs NCBI-GeneID:  109922748 NCBI-ProteinID:  XP_048453459 LinkDB All DBs Position 5:114407932..114474214 Genome browser AA seq 335 aa AA seqDB search MKTRNFSLKFLLAMELPFVLLAMSSTKVPESLIDYELDGSGTETEDDDFYSGSGSGAGFI LNNLDVELTTTYHTLPSTASSNLYSSSQVALTSKMITEADANILTEHHDLPVVDTTIEAT LTSSKSTTLIPQDTDIHLVTKNNTKYFLARGVGPKNDVAEVSSAKPTVHTVFPDNAVVAV NDKSLADSKMFAASEMMTVVDENAEQIEKEVEIEIVDEMEKNNTNNESDLYFPDLIESRT TLNQNHVPDSKTSVKPPQERYSHEASASGSFLERRELLAATVASGFVGLVLAVLLVAVLV YRMKKKDEGSYTLDESKQLPSGGYQKPEKQEEFYA NT seq 1008 nt NT seq  +upstreamnt  +downstreamnt atgaagacgcgaaatttcagtctgaagtttcttttggcaatggaattgcctttcgtcctc ctggcaatgtcttcaacaaaggtgccggaaagcttaattgactatgaactagatgggtct ggcacagagactgaagatgatgacttttattctggctctgggtctggtgctggctttatt ctgaacaatcttgatgtggagcttacaacaacttatcacacacttccttcaacagcttca agtaatttatattcatcaagtcaagtagccttgacaagcaaaatgatcacagaagcagat gcgaatattttaacagagcatcatgacttgccagtggttgatacaaccattgaagccaca ctgacgagtagtaaatctaccactcttattccacaagacactgatattcaccttgttact aaaaacaacactaaatattttctggcgcgtggagttggacccaaaaatgatgttgctgaa gtgagcagtgccaagcctactgtccacaccgtgttcccagataatgcagttgttgctgtc aatgacaaatccttagctgactcaaagatgtttgcagcaagtgaaatgatgacagtggtg gatgaaaatgctgaacaaattgaaaaggaagtggagatcgagatagttgacgaaatggaa aagaacaatacaaacaacgagagtgatttgtacttcccagatttaatagaaagtagaact actctgaatcaaaaccacgttccagattcaaaaacatcagttaagccaccgcaggagaga tattctcatgaagccagtgcatctgggagttttctggaaagaagggaattattggcagcg acagttgcttcaggatttgtgggacttgtacttgctgtcctacttgtggcagtgctcgtg tatcgaatgaagaaaaaagatgaaggaagttatacattggatgaatccaagcagctacca agtggaggctaccagaaaccagaaaaacaagaggagttctatgcataa

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