Rhincodon typus (whale shark): 109922831
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Entry
109922831 CDS
T06055
Name
(RefSeq) ras-related protein Rab-40B isoform X1
KO
K07928
Ras-related protein Rab-40
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109922831
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
rtp04031
]
109922831
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
109922831
GTP-binding proteins [BR:
rtp04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
109922831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
109922831
NCBI-ProteinID:
XP_048466841
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All DBs
Position
23:34195701..34262543
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AA seq
285 aa
AA seq
DB search
MVVAAGGRAETCLMNFYLFNERNCPRSARAWSVARERMSQKGSPVKAYDFLLKFLLVGDS
DVGKGEILASLQDGASESPYGYNMGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSY
SRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRLHLAFKRQVSTEQAQA
YAERQGMTFFEVSPLCNFNIIESFTELARIVLMRHGMDRLWRPNRGRRSSEKSFQPVQSF
FTTETSIPATSCAQPTRSLLPSHCFMHACTSSGQIAPSCYLKESP
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggcagcaggggggcgagctgaaacttgtttgatgaatttttacttgttcaac
gaaaggaactgtcctcggtccgcccgagcatggagcgtagctcgtgagaggatgagccag
aaaggcagccccgtgaaggcttatgactttctgttgaaattcttactagtgggtgatagt
gatgtggggaagggagagatcctggccagccttcaggatggagctagcgaatcgccctat
ggttacaacatgggtattgattacaagacaacaacaatcctgttagatgggcgtcgggtg
aaattacaactctgggatacatctggacagggcaggttctgcaccatcttccgttcctac
tctcgaggagcccagggtgtaatcttggtctatgacattacaaatcgttggtcatttgat
ggtatcgacaggtggatcaaagaaatagatgagcatgccccaggtgtacctaagatcctg
gttgggaatcgtcttcacttggcctttaagcggcaggtatcaacagaacaggctcaggct
tatgctgaaaggcaaggcatgacattctttgaagttagccctttgtgcaactttaacatc
attgagtcattcacagaactggcaaggattgtgttaatgcggcatggaatggacaggctt
tggaggcctaaccgtggtcgacgctccagtgaaaaatcgttccagcctgtccagtctttc
tttacaactgaaacctccatacctgcaacatcctgtgctcagcctacaagatctctgctg
ccgagccattgtttcatgcacgcatgtacatctagtggacaaattgccccttcctgttac
cttaaagagtcaccttaa
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