Rhincodon typus (whale shark): 109922845
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Entry
109922845 CDS
T06055
Name
(RefSeq) cohesin subunit SA-1-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109922845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109922845
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109922845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
ZSWIM1-3_RNaseH-like
Cnd1
Motif
Other DBs
NCBI-GeneID:
109922845
NCBI-ProteinID:
XP_048476042
LinkDB
All DBs
Position
45:complement(7701923..7745997)
Genome browser
AA seq
1395 aa
AA seq
DB search
MPVLRSKKATPGSEKGLCMSPASVAGSVESRFSSPTYFRREQVAELLIGDDPDSDNITSE
SESDTGSDFEDTLKKGRKQMASAPSKAPPPKRPRHTPVEKKVALQKRNPGKQQKPSPVQQ
SVNLAKDAPQSSKRSRQVLAESNQKVVKDAGTAWLDSDQEASNLSVSTTQSKSALQLSRS
RREQAKSNQTVGKENVSMYLSSDQETSNLSVSTRQPKRMAQSSRNAGLKSGMKAAAPGQQ
KEASNLFEAVKLAKSAMQTLVDEWLEVYKLDRETGLLELLNFFIHSCGCKGVVTSQMFHK
MQNAEIIRKMTEEFDEDSGDYPLSMAGPMWKKFRQNFCEFIAVLVRQCQYNVIYDEYMVD
ILISLLTGLSDSQVRAFRHTSTLAAMKLMTALVDVALNLNVHQENIQRQYDTERNKAAGK
RANDRLEMLLQKRKELQQNQEEIENMMNAIFKGVFVHRYRDLIAEIRAICMEEIGVWMKR
YSDSFLNDSYLKYVGWMLHDKQREVRLRCLKSLQNLYESKEITQKLELFTNRFKDRMVSM
VLDVDYDVAVEAVRLLTLILKNTEDVLTNEECECVYPLVYASHRPTAAAAGQFVHVKLRR
HYDAEQEEAVAKDRGRRSVNGEFIKLVLTFFLESELHEHCAYLVDSLWDHAGSVLKDWEG
MTELLLEEIGDGEDGLSDQEESALIELMVCSMRQAVEGHPPIGRHSGKKLLTVKEKKQQM
DDRVKLSEHLIVIIPQLLAKYSADAEKVANLLLIPGFFDLDVYCTRRLEKYLDLLLKQIR
DIVEKHTEMNVLEACSRAYYTLCNEEYTIRNRVDIARSQIVDTLVEIFTHSVEELLHEVG
EIDEDNLYTVATSLKRITALYNAHDLTRWELFDNCCRVLERGIDTGEIPEQIIVQALLCA
HFHILWRLAVISEYPATKEQLIRLRKQRNTVFTMCQHGLSNVSTRVREQSFILLCDLLVI
FSSQMTRDGHDDLQPLVFTADLPLVSELLSFVMDHVFVEPEDDGDDETLKIEMLHKRRNF
LAGFCKLIIYNMVDLRTAADIFKHYMKYYGDYGDIIKEMLAKARLIDKVECAKTLLLSLQ
QLFNELVQDQGPDIDRSSIGFCTIKDLGRRFALTFGIDLIKSRQPVVSLHLDGIKFAFQQ
YRLNALDLPPQNLPFLDIVSEFSTKLLQQDKKAVLAYLDKTFPATLNLTAQGWLPLTSYR
RSLLARGEDDTMSVISSRTVSARSKKAPASSAKRRRLEVSDLSSDGVWPQSGGSMRVDGK
LRTPILTSTILRPPQWDTGSLQSSDDQDSEKGSESEFAQSRSWLESQSQNKRQNERVQKN
RQQKNRMRQRHKKQQLLSLMEEDGEEAETGEIISDATSEHSDANSEISLPAPIRKGRAGL
LQDLFDSSILDIDDF
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttgagatcgaagaaagccacccccggctctgagaaggggttgtgcatgtct
ccggcgagcgttgctgggagtgtcgaatcacggttttcgagcccaacgtatttccgcaga
gagcaggtggcagagctattgatcggagatgacccagactcggacaacataacgagtgaa
tcggagtccgacactgggagtgatttcgaggatactttgaagaaagggagaaaacaaatg
gcctctgctccttccaaggccccaccccctaagaggccaaggcatacaccagtggagaag
aaagtggccctgcagaagaggaatcctggtaaacagcaaaaacctagccctgtccagcag
tcagtgaacctggcaaaggatgccccacagtcctccaagagatcaagacaagtgctggca
gagagcaaccagaaagtggttaaagacgctggtacagcatggttggacagtgatcaggag
gccagtaacctgtctgtgagcaccactcagtctaaaagtgcattgcagctctcgagatca
aggcgagaacaggcaaagagtaaccagacagtggggaaagaaaatgtctctatgtacctg
agcagtgatcaggaaacaagtaatctgtcggtgagcaccaggcagccaaaaagaatggcc
cagtcctccaggaacgcaggactgaagtcgggcatgaaagcagctgctccaggacaacag
aaagaagccagcaacctgtttgaggcagtgaagcttgcaaagagcgccatgcagacactg
gttgatgaatggctcgaggtttacaagctggacagagagactggtctgctggaattgctc
aacttcttcatccactcctgtggctgtaaaggtgttgttacctcacagatgttccacaag
atgcaaaatgcagagatcattcggaaaatgactgaggaatttgatgaggatagtggtgat
taccccctatcgatggcaggccccatgtggaagaagttccgccagaatttctgtgaattc
attgctgtgttggtgcgtcagtgtcagtacaatgtcatctacgatgaatatatggtggat
atactgatctccctgctgacaggactgtctgattcccaagtccgagcattccgacacacc
agcactttggctgcaatgaagctgatgactgcgctggtggatgtggctttgaatctgaat
gtccatcaagaaaacatccagcgtcagtatgacactgaacggaacaaagctgctgggaaa
cgggccaatgaccgtctggagatgttgctgcagaaacgcaaggagctccaacaaaatcag
gaagagattgagaacatgatgaatgcaatcttcaagggagtgtttgtccaccgatatcgg
gatttgattgcggagatccgcgctatctgtatggaggagattggtgtgtggatgaagcgt
tacagcgactcatttctcaacgacagctacctgaagtacgtcggctggatgttgcacgac
aagcaacgggaggtgaggctgagatgtttgaagtctctccagaatctgtacgaaagcaaa
gaaatcactcagaaactggagctcttcaccaaccgattcaaggacagaatggtgtccatg
gtcctggatgtggattatgatgttgcggtggaagcagtcaggctattgactctcattctg
aaaaataccgaagatgtgttgaccaatgaggagtgcgagtgtgtttatccgctggtgtat
gcctctcaccgtcccactgcggcggctgctgggcagtttgtccatgtgaagttgcggagg
cattatgacgcagaacaagaggaggctgtggccaaagaccgaggaaggcgcagtgtcaat
ggcgaattcattaaattggttctcacttttttcctggagagtgagctccatgagcactgt
gcatacctagtggacagtctgtgggaccacgctggctcagtcctgaaggattgggaaggg
atgacggagttgctcctagaggagattggagatggtgaggacggactcagtgatcaggag
gagagtgctctgatcgaactaatggtgtgctcgatgcgacaagcagtggagggtcaccca
ccaatcggcaggcattctgggaaaaagctcctgactgtaaaagagaagaagcaacagatg
gacgaccgggttaaactatctgaacatttaattgtcatcattccacagctcctggccaag
tactctgcagatgctgagaaagttgcaaatctgctactgattcctggtttcttcgatttg
gacgtttattgcacgaggcgactagagaagtatttggacctcctgctcaagcagatccgg
gacattgttgagaagcacacggagatgaacgtgctggaggcatgtagccgagcatactac
accttgtgcaatgaggaatacaccatccggaatcgtgtggacattgctcgcagtcagatc
gttgacactctggtcgaaatattcactcactccgtggaggagctgctgcatgaggttgga
gagatagatgaggataacctgtacacagtggcgacatcactgaagagaatcactgccctc
tacaatgcccatgaccttaccaggtgggagttattcgataactgctgtcgtgtcctggaa
cgagggattgacacaggagagatcccagaacagatcattgtacaagcgctgctctgtgct
cactttcacatcctgtggaggctggctgtcatctcggagtatccagcaaccaaggagcag
ctcatcagactgaggaagcaacggaacacagtcttcacaatgtgtcagcacggcctgtcc
aatgtcagcaccagagtgagagagcagtccttcatcctgctgtgtgacctgctcgtgatc
ttcagctcacagatgacgagggatggtcacgacgatcttcagcccctggtcttcactgct
gaccttccactggtgtctgagttgctaagtttcgtcatggaccatgtgtttgtggaaccg
gaggatgacggcgatgatgagacgttgaagattgagatgctgcacaagagaaggaatttc
ctggctggattctgtaaactcattatctacaacatggtggatctgaggactgcagctgac
atcttcaagcattacatgaaatactacggtgattatggcgacattatcaaggagatgttg
gctaaagcacggctgattgataaagtggagtgtgccaagactctcctcctcagcttacag
cagttgttcaatgaactagtccaggatcagggccctgacattgaccggtcctccattggc
ttctgtaccattaaagatctcggcaggaggtttgcactgaccttcgggatagacctgatc
aagagcaggcagccggttgtctcgctgcatttggatgggataaaatttgccttccagcag
tatcgtctgaatgctttagacttgcctccccagaacctgccattcctcgacatcgtcagt
gaattctcaaccaaactgctgcagcaggacaagaaggcagtcctcgcctacctggacaag
acattcccagctaccctcaacctgaccgctcagggctggctcccgctgacctcataccgt
cgttcgctgctggctcgaggggaagatgacaccatgtctgtgatcagcagcaggacagtg
agtgcacgcagcaagaaagcaccggcatcgtctgcaaagaggaggagactggaagtttca
gatctgagttcagatggtgtgtggccgcagagtggtggcagtatgcgtgtagacggtaaa
ctgagaaccccaatactgacctcgaccatcctgagaccaccccagtgggacacaggaagt
ctgcagagctctgacgaccaggattcggagaaggggtcagagtctgaatttgcacaaagt
cgctcctggcttgagtctcaaagtcagaataagaggcagaatgagagggttcagaagaac
cggcagcaaaagaatcgaatgcgacagcgacacaagaaacagcagctgctcagtctgatg
gaggaagatggtgaagaggcggagacaggagaaatcatatcagatgccacaagcgagcat
tctgatgcaaacagcgagatcagtctgcctgcgcccatcagaaaaggcagagctggactg
ttgcaggatctgtttgattccagtattctcgacattgatgatttctga
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integrated database retrieval system