Rhincodon typus (whale shark): 109922847
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Entry
109922847 CDS
T06055
Name
(RefSeq) ras-related protein Rab-39B isoform X1
KO
K07925
Ras-related protein Rab-39B
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109922847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109922847
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
rtp04031
]
109922847
Membrane trafficking [BR:
rtp04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
109922847
GTP-binding proteins [BR:
rtp04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
109922847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
TniB
AAA_22
Motif
Other DBs
NCBI-GeneID:
109922847
NCBI-ProteinID:
XP_020378471
LinkDB
All DBs
Position
14:32548040..32563508
Genome browser
AA seq
213 aa
AA seq
DB search
MEAIWVYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEAKVHVQPFQIVFVL
VGHKCDLATQRQVSKEEAEKLAAAYRMKYIETSARDSINVEQAFTDLTRDIYELVRRGDI
MMQEGWEGVKSGFVPNVVHSSEEAVKSGRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggctatctgggtctatcagttcaggttgatagtcatcggggactccacggtgggc
aagtcgtgcctgatccgtcgtttcaccgagggaaggtttgcccaagtgtcggaccccacg
gttggtgtggacttcttctcaaggttggtagagattgagccaggaaaacggattaagttg
cagatttgggacacagctggtcaggagcgattcaggtccataactcgtgcgtattacagg
aattcagtgggaggactgctcttattcgatataactaaccgtaggtcattccagaatgtg
catgagtggttggaagaggccaaagttcacgtccaaccattccagatcgttttcgtgctg
gttggccataaatgtgacctggcaacccaacggcaagtgtcaaaggaggaggcagaaaag
cttgctgcagcgtaccggatgaaatatatagagacgtccgcaagagattccatcaacgtt
gaacaggcctttaccgatctgacaagagatatctatgaacttgtcagaaggggtgacatt
atgatgcaagagggatgggaaggagtgaagagtggttttgttccaaatgtggtccactcc
tcagaggaagctgtcaaatcaggcagaagatgcctttgctaa
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