Rhincodon typus (whale shark): 109922921
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Entry
109922921 CDS
T06055
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109922921 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109922921 (snrpd2)
03032 DNA replication proteins [BR:
rtp03032
]
109922921 (snrpd2)
Spliceosome [BR:
rtp03041
]
Complex A
U1 snRNP components
Sm proteins
109922921 (snrpd2)
U2 snRNP components
109922921 (snrpd2)
Complex B
U1 snRNP components
109922921 (snrpd2)
U4/U6.U5 tri-snRNP components
109922921 (snrpd2)
Complex C
U2 snRNP components
109922921 (snrpd2)
DNA replication proteins [BR:
rtp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
109922921 (snrpd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
109922921
NCBI-ProteinID:
XP_020378534
LinkDB
All DBs
Position
39:7346966..7358515
Genome browser
AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctaaacaagccgaagagtgagatgactcccgaggagcttcagaagagagag
gaggaagagtttaacacagggccactctctgttctgacgcagtctgtcaaaaacaacaca
caagtccttatcaactgtcgcaacaacaagaagctgcttggtagagtcaaggcctttgat
cgacattgcaacatggtgctagaaaacgttaaagagatgtggactgaggtgcccaagagt
gggaaaggcaagaagaagtcaaaaccagttaacaaggaccgatacatctccaaaatgttc
ctccgaggggactctgtgattgttgttcttagaaacccattgattactggcaaatga
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