Rhincodon typus (whale shark): 109922949
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Entry
109922949 CDS
T06055
Symbol
pcbp3
Name
(RefSeq) poly(rC)-binding protein 3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109922949 (pcbp3)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109922949 (pcbp3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_5
MOEP19
Motif
Other DBs
NCBI-GeneID:
109922949
NCBI-ProteinID:
XP_048454824
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All DBs
Position
7:16229359..16338205
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AA seq
376 aa
AA seq
DB search
MDPKVTEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVT
ITGPTDAIFKAFAMIAFKFEEDIDNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKI
KEIRESTGAQVQVAGDMLPNSTERAVTISGMPDAIIQCVKQICVVMLEVEYKSPPKGATI
PYRPKPASAPVIFAGGQVRADPLSASAANLSLLLQHQPLPAYTIQGQYAIPHPDDACLLS
AEYKATLASTLWRSPQLTHPSSQLTEPAWRPESLRGKMELKNCIEDSGTWGLDANPPAST
HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANAAEGSTERQITITGSPANISLAQY
LINARLTSEVSGMGTL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggaccctaaagttaccgaaggtgggctgaatgttacccttaccatccgactgctgatg
catgggaaggaagttggaagcatcattggaaagaaaggtgaaactgtgaagaaaatgcgc
gaggagagtggtgcacgcattaatatctctgaaggaaattgtcccgagagaattgtaacc
atcacaggtccaactgatgcaatattcaaggcatttgcaatgatcgcttttaaatttgag
gaggacatcgataactcaatgtcgaatagtacagccaccagtaaaccacctgtaaccctg
cggcttgtggtgccagccagtcagtgcggatcactgattggcaaagggggttccaagatc
aaagaaattcgtgagtcaacaggggctcaagtccaggtggcaggggatatgctgcccaat
tccactgagcgtgctgtgacaatctctgggatgccagatgctatcatccagtgtgtgaag
caaatatgtgtggtgatgctggaggtagagtataagtccccaccgaaaggtgccaccatc
ccctaccgcccaaagcccgcctctgcccccgtcatttttgcaggtggccaggtaagagca
gatcccctctcggcctccgcagccaacctcagcctcttactgcagcaccagccactgcct
gcctatacaattcagggacagtatgccattccacacccagatgatgcatgcctcctgtcg
gctgagtataaagcaacactggcgtcgacgttgtggagaagtccgcagcttactcacccg
tcctcccagctgacggaacctgcatggagacctgagtccttgagaggaaaaatggaatta
aaaaactgtatcgaagactcaggaacctggggtttggatgccaatcccccggccagtact
catgagctcaccattcccaatgatctaataggatgtataatcggcagacaaggcagcaaa
atcaatgagatcagacaaatgtctggggctcagattaaaatagctaatgcagcagaaggc
tcaacggaacgtcagattactattactggatcccctgccaacataagccttgcacagtac
ctcattaatgcaaggctaacatctgaagtctctggaatgggcacactttaa
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