Rhincodon typus (whale shark): 109922962 Help Entry 109922962         CDS       T06055                                  Symbol lama1 Name (RefSeq) laminin subunit alpha-1   KO K05637   laminin, alpha 1/2 Organism rtp  Rhincodon typus (whale shark) Pathway rtp04510   Focal adhesion rtp04512   ECM-receptor interaction rtp04518   Integrin signaling rtp04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:rtp00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109922962 (lama1)    04518 Integrin signaling     109922962 (lama1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     109922962 (lama1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     109922962 (lama1) SSDB OrthologParalogGFIT Motif Pfam:  EGF_laminin Laminin_G_1 Laminin_B Laminin_G_2 Laminin_N EGF_LMN_ATRN Laminin_I Laminin_G_3 3keto-disac_hyd F5_F8_type_C ConA_2nd_BAM2 Phage_phiTE_072 Motif Other DBs NCBI-GeneID:  109922962 NCBI-ProteinID:  XP_048452144 LinkDB All DBs Position 4:complement(105610263..105832087) Genome browser AA seq 2696 aa AA seqDB search MYESTPTAMALWNEQFTVSFAPGLFPAILNLASNAVISTNATCGENGPEMYCKLVEHVPG RPIRNPQCRICDSNSANRKERHPIVSAIDGTNNWWQSPSIQNGRKYHWVTITLDLRQVFQ VAYVIIKAANSPRPGNWVLERSIDGVEFTPWQYYATSDTECLTRYNIAPRIGPPTYKRDD EVICTSYYSRLVPLEHGERLQCQCEHNTCGESCSECCPGYHQKPWQSGTFASDNTCEKCN CHDKAEDCYYDQSVADRNLSLNIHGQYNGGGVCVNCTNNTAGINCETCIDGFYRPHKVSP FDRDPCLPCGCNPAGSINTTCVKDDNHAVIERGLFPGQCHCREGYAGKTCSHCALGFKGF PNCARCNCSLAGSINDDPCAEPCHCKRNVVGENCNQCKSGFYNLQERNPEGCTECFCFGL SGVCESISWSITQVTDVNGWQVTDPQGVKKVQTSQNLFDGSKQVNINNTEARKSLPALYY WTAPELYLGNKLIAYGGYLKFSVLYDFPMESADNEVITNIDVIIEGNGRTLSTGSEGLRL QPYEEQLVSVQLLPDNFVDLNTNNAIDRDRLMTVLVNVTRLQIRATYNIAKQFVYRLSSV TLDVANPNAIDILPAVDVEHCECPADYSGISCESCAPGFYRVDGILFGGICQQCECNGHT TECDTNGTCLSCQHNTIGHNCDQCILGLYGDPSRGTSEDCQPCACPLNISSNNFSPTCYL NKTGSIICDQCQPGYAGTRCERCADGYYGNPTTPGEFCVPCDCNGNVEVSVPGKCDPVTG ECLKCIGNTAGRWCEQCAEGFFGDAVVAKNCRTCDCNVNGSYGEACDPKTGHCQCKSNVL GQKCDQCLHGYFGLSTGQGCVPCNCSQLGSLSEDCSEEGLCRCVPGVSGKKCDHCAHGFY GFQDGGCTPCDCAHTRNNCVEDSGQCICPAHTHGDKCEHCDANHWGHDPETGCKFCNCSA VGSVGPRCDRVSGQCPCKEEFSGEKCNKCAIGHRDYPQCTACKCNPSGTRPEKCDLTQGV CSCEENTGFCPCKDSVSGVHCDECKPGSFALSLQHPAGCSSCYCSGVSNSCSELQGLVRI PLTLTPDQLRMHVVTQGNLTGTREGIFAQLPETLLDAALVQRHLQTEPYYWSLPAQFTGS KLLAYGGKLRYVVAFYALEGSGSLNLEPQILLKGGHSSKMVIYRNMPTPANGEQSRHVIH MTEHEWKYFNSVSDKPVTHPDFMSVLSNVEYILIKASYGTGLQQSRISNISMEIAMEDDG THASRDRAHQIEICDCPPGYAGLSCQECAPGFYRQKMIFGLQSLDIVCVSCQCNNHSNVC DLDTGKCQACRDNTVGDHCELCASGYYGRVNGSVADCSLCACPRSNSGSFSPTCVLEGVR DFRCTSCLVGYEGQYCERCAPGYYGNPHVPGGRCQRCECNPNGSVHINCDPLMGHCVCKS GVTGRLCNQCESKHVLIESECISCDDDCTGLLLSDLINLETILMTLNVTGFDPAPYNLFA DIENRTEQYKVTLSTERNTSALVAKVEEQMSALILGISHLQKKVALEFAGGQDLNEAAGR TLTRGLELAAFVNKTTKTINALVDMASHLNETLGTDLNLSDTKLQQLQREILNMLESMQN RVFNQSKGISESELKAARHLLASVQKAFQKSRKEMEDLKNRVKFMLVQHANELQEARELV NKARSNTNESSRLLLSITSGLQELQEKQQTIKNIRMLTTNVIQDGREMLNTAVNMTEDIV NNTAFLEQYSDQLDLWNTKMRMHLDKLVMEMTQKSVLSLVYKAEDHAEELSEIANLLNSS LAAVRNVSLNATVAVNTHSNIKALIDEAANIVLEARNKADAALKLVIGPQTPLEEFGRKS AQHSSEILSDANGLKNKTAGLVNQLNGLKEKVDQIQKGVGNVSRHLREPWHILAQMPNGT DARFQEARDRVVSANLTAAASLTEIQQFSRQLLSTSGSIARINKTVRETNVLISDSAKTA AAAGKKVREVEIQANYLLDKLKPLKMLEDNLNRNLSEIKELIIQARKQAASIKVAVSANR DCIRAYQPALTSSNYNTLTLNVKTSESENLLFYLGSSTSTEFLALEMRHGRVGFLWDVGS GTTRLEYPNQQINSNKWYRIHAARFGRMGTLSVQEVGSSSLDKPVVKTATSPGTSTVLDV SNTTLVFVGGLSRQMKKVAAVKITHFKGCLGEAFLDGKSIGLWNFREREGSCSGCFARSQ NEDIAFHFDGSGYSAVEKVLRSTTTQLVMQFSTFSPNGLLLYLASNGTRDFLAVELADGK VRVTFDLGSGVLTLMSEKRYNNGTWFKIAFQRNRKLGILAVMDPFNSTDRETKQGESPGT ASDLNRGHKDPIYVGGLPRSRSYSHIYSKHLKPTGLENQGLFRFTVSLGHMMLQSEFGFV VPILCLASECPEAQILDRDFHRVKTEYVKRRGMITIDGKESSPALGDGNSLDVEGKLYLG GLPLDYTARKIGNATHSIPACIGNVTLNNKPLNLERPVSVLTVSRCYTAVQEGTFFDGTG FAALVKEGYKVRSDVIITFEFRSTTRNAVLLGISSAKVDAIGLEIVNGKVLFHVNNGAGR ITARYEPKDSNQLCNGKWHKLRANKSKHRITLTMDGVSVQADNPHLQSTSADTNDPIYVG GYPANVKQNCLTLQEPFQGCIRNLKLTKDQQIQAFDFSKAFDLRGVFPHSCPGIEH NT seq 8091 nt NT seq  +upstreamnt  +downstreamnt atgtatgagtccacacccacagccatggccctttggaacgagcaatttactgtttccttt gcaccaggtctattcccggcaatcctgaatcttgccagtaatgcagtgatctccaccaat gcaacatgtggcgaaaacggtccagagatgtactgcaagctggtggagcatgttcctggg cggccaatacgcaacccgcagtgtcgtatctgtgactcgaacagcgcgaatcgcaaagag cgccatcccatcgtcagtgcaatagatggcaccaacaactggtggcagagtcccagcatc cagaatgggaggaagtatcactgggtgacaattaccctggacctgagacaggtatttcag gtagcctatgttatcattaaggcagcaaactctcctcggcctgggaactgggtgttggaa cgctccattgatggtgttgagtttacaccatggcagtactacgccacaagtgacaccgag tgcctgacccgctacaacattgcacctcggattggaccaccaacctacaagagggatgat gaagtgatctgcacatcttactattccagacttgtcccgctggagcacggagagagattg cagtgccaatgtgaacacaatacctgcggggagagctgcagtgagtgttgccctggttac catcagaaaccatggcagtctggaacctttgcttctgacaacacttgtgagaagtgtaat tgccatgacaaagcagaagactgttactatgaccagagtgtagctgatcgcaacctgagt ttgaacatacatggtcagtacaacggtgggggtgtctgtgttaattgtacgaacaacact gcaggcatcaactgtgagacctgtattgatggcttctacagacctcacaaggtctctcct tttgaccgtgatccttgcttgccatgtggctgtaacccagcaggatctataaatactact tgtgtgaaggatgataatcacgcagttatagaacgtggtctgttccctggtcagtgccat tgccgagagggttatgcagggaagacgtgcagccattgtgctctgggtttcaagggtttt cccaattgtgcgcgctgtaactgtagtctagctggcagcatcaatgatgacccttgtgct gagccatgccattgcaagagaaacgtggtgggagagaactgtaaccagtgcaaatcaggg ttctacaatctgcaggagaggaaccctgaaggatgcacagaatgcttctgttttggactc tctggtgtttgtgaaagcatttcctggtccattacacaggtcacggatgttaatggatgg caagtgactgaccctcagggtgtaaagaaggtgcagacttctcagaatttgtttgatggc tccaaacaagtgaacattaacaacaccgaggccagaaagtctctgcctgctttatattac tggacagcgccagaactgtacttgggcaataagttgattgcctatggaggctacctgaag ttctctgtgttatatgattttccaatggaaagcgctgataatgaggtgatcaccaatatt gatgtcatcattgagggcaatgggcgaacactgagtacagggtctgaaggcctccggctc caaccatatgaagaacaattggtttcagttcaactcttacccgataactttgtggacctt aatacaaataatgccatcgaccgagatcgactcatgactgttctagtaaatgtaacacgg ttgcagatcagagccacatacaacattgccaaacagtttgtgtacaggctgagttcagtc acgttggatgttgcaaaccccaatgccatcgacattcttcctgcagtcgatgttgaacac tgtgaatgcccagcagactactctggcatctcctgtgagtcttgtgccccaggtttttat cgtgtcgatggaatattatttggaggaatctgccaacagtgtgaatgcaatggccatacc acagaatgtgacactaacggcacttgcttgagctgtcagcacaacacaatcggacacaat tgtgaccagtgcatccttggattatatggtgatcccagcagagggacgagtgaggattgt cagccatgtgcttgcccactgaacatttcctctaacaacttcagccccacctgctactta aacaaaacaggaagcatcatttgtgaccaatgccagccaggctatgcagggaccagatgt gaaaggtgcgctgatggttactatggaaatccaacaacacccggagagttctgtgtgccg tgtgactgtaacggcaacgttgaggtgtcagtgccaggaaaatgtgaccctgtgacagga gaatgtctgaaatgtatcgggaacacagcaggaaggtggtgcgaacagtgtgcggagggg tttttcggtgatgcagttgttgccaaaaactgccgcacttgtgactgcaacgtgaatggt tcctatggcgaggcatgtgaccccaagaccggccattgccagtgcaaatctaatgttctg gggcagaaatgtgaccaatgtttgcatgggtattttggcttgagcactggacagggctgt gttccctgcaactgcagccaattgggctccctctctgaggactgtagcgaggaagggctc tgtcgctgtgtgccaggggtgagtggaaagaagtgtgaccactgcgcacacggcttttat ggattccaggatggtggctgcacaccttgtgactgtgcccacactcggaataactgcgta gaggattcaggccagtgtatctgcccagcacacacacacggagacaagtgcgaacactgt gatgccaaccactggggtcatgaccctgaaactgggtgcaagttttgtaactgcagtgca gttggttccgttggtcctcggtgtgacagagtaagtggtcaatgcccttgcaaagaagag ttcagcggagaaaaatgcaacaagtgtgccattggccatcgagactacccacaatgcacc gcttgtaaatgcaatcccagtggtaccagacccgaaaaatgtgacctgacccaaggagtg tgcagctgtgaggagaacacagggttttgtccctgtaaggacagcgtctctggtgttcat tgcgatgaatgcaaaccaggatcgtttgctctcagtctccagcacccagctgggtgcagc agttgttactgttctggagtgtctaattcctgctcggagctccaaggactggtcagaatt ccactgaccctgactcctgaccagctgagaatgcatgttgtcacccaaggcaacctaact ggtaccagagagggcatcttcgctcagctcccagagaccttgctggatgctgcactagta cagaggcatctgcaaacagaaccatattactggtcactacctgcccagttcacaggcagt aagcttttggcgtatggagggaaactgagatatgtagttgcattttatgccctggaaggc tctggaagcttaaacctggaaccccagatcctactgaaaggaggccacagcagcaaaatg gtaatttacaggaacatgccaactcctgcaaatggagaacaaagcaggcacgtgatacac atgactgagcacgaatggaagtatttcaattcagtctctgacaaacctgtcacccaccct gatttcatgtcagtcctcagcaacgttgaatacatcctaattaaagcttcctatggtact gggctccagcaaagcaggatttctaatatctccatggagattgcgatggaggatgatgga actcatgcatcgagagatcgtgcacatcagattgagatctgtgactgtccccctggatac gcaggcctctcatgccaggaatgtgctcctgggttctacagacagaagatgatatttggc ctacagtcactcgatattgtgtgtgtctcatgccagtgcaacaatcacagtaacgtctgt gaccttgatacaggcaaatgtcaagcttgtcgtgacaacactgtgggtgatcactgtgag ctgtgcgcttcagggtactatggcagagtcaatggatctgtcgcagactgctccctttgt gcctgtcccaggtccaattctggcagctttagccccacgtgtgtattggagggtgtacgt gatttccgctgtacttcctgcctggttgggtatgaaggacagtactgtgagagatgtgcg ccaggttactatggtaacccacatgttccaggcggtagatgtcaaaggtgtgaatgtaac ccgaatggttctgtgcacatcaactgtgatcctttaatgggccactgcgtttgcaagtca ggtgtaacagggcgtctctgcaatcaatgtgaatctaagcatgtgctgatagaaagcgaa tgcatatcttgtgatgatgattgcacaggactcctgctatctgaccttatcaatttggaa accattttgatgacattaaacgtaacaggctttgatccagctccctataatctctttgct gacatagaaaacaggacagaacaatacaaggttactctgtcgacagaaagaaacacaagt gctctcgttgcaaaggtagaagaacagatgtctgctttgatcttggggattagccactta cagaagaaggtcgctctggagtttgctggtggacaggatctgaatgaagctgctgggaga acactaaccaggggtttggagcttgcagcatttgtaaataaaacaaccaagacaataaat gctcttgttgacatggcaagtcacctgaatgagacactgggaactgacctgaatctctca gacaccaaactgcagcaactccagcgcgagatcctgaatatgctggaatccatgcagaat agagtgtttaatcaatcgaaaggaatttcagaatctgaactaaaagcggcacgccatctg ttggccagcgtgcagaaggcgtttcagaaatcccgtaaggaaatggaggacttgaaaaac agggtcaagtttatgttagtgcaacatgccaatgagttgcaggaagctcgagagctagtg aacaaagcacgttcaaacaccaacgaaagcagcaggcttctcctcagcatcaccagtggt ctgcaagagctccaggaaaagcagcagactatcaagaatatcaggatgctgacaacaaac gtgatccaagatggaagagagatgttgaacactgcagtaaatatgacagaagacattgtg aacaacacagcttttttggagcaatacagcgaccagctggatttgtggaatactaagatg aggatgcaccttgacaagttggtgatggagatgactcagaagagtgtgctcagccttgtc tacaaggcagaagaccatgctgaagaacttagtgagattgcaaatctgctaaacagttcc cttgcagctgtaagaaacgtgtctctgaatgccacagtggctgtcaacacacattccaac atcaaagcactcattgatgaagctgcaaacattgtattagaagctaggaacaaagctgat gctgcattaaagttggttatcggtcctcaaacaccactggaggagtttggcaggaagtca gcccagcatagttcagagatcctgagcgatgcaaatggcttgaaaaacaaaactgctggg cttgtgaatcagctgaatggattaaaggagaaggttgaccagattcagaaaggcgtgggt aatgtgagcaggcacctcagggagccctggcacattctggcacaaatgccaaatgggacg gatgctcgattccaagaggcaagggatcgtgtagtctcggcaaatctgacagcagctgca tctctcactgagattcagcagttcagtcggcagctgctgagcacatctggttctatagcg aggatcaataaaaccgtcagagaaacaaatgtcctcatcagtgattcagcgaagactgcg gcagcagctgggaagaaggtgcgggaggttgaaattcaagccaactacctgctggacaag ttgaagccgctgaaaatgctggaggacaacctgaacagaaacttatcagagataaaggaa ttgatcattcaggcccggaagcaagctgcttcgattaaggtggcagtatcagccaaccga gattgtatccgtgcctaccaaccagcgctaacaagcagcaattacaacactctgacactg aatgtgaaaacctccgaatcggaaaatttgctgttctacctcggcagcagcaccagcact gaattcttggctctggagatgcgacatggcagggttggcttcctatgggatgtgggctcc ggcacgacaagattagaataccccaatcagcaaattaacagtaacaagtggtacaggatt cacgctgccaggtttggacgtatgggtaccttgtctgttcaagaagttggatcgtccagt ttagacaagccagtggtaaagacagccacatctcctggaacctccactgtactggatgtg agcaataccacactggtgtttgttggaggtctctctcgacagatgaagaaagtagcagct gtgaagattacccacttcaaaggttgcttgggtgaagccttcctggatgggaaatccatt ggcttgtggaacttccgagaaagggaagggagttgtagtgggtgctttgcaaggtcacag aatgaagacattgctttccactttgatggcagtggctattcagcagtcgagaaggtgcta cgttccacaacaacccagctagtgatgcaatttagcacattctcaccaaatggcttgctc ctgtacctcgcttcaaatgggaccagagacttcttagcagtagagctggcagatgggaaa gtgcgagtgacctttgaccttgggtctggagttctcacccttatgtctgagaaacggtac aacaatggaacatggtttaaaattgcatttcagcgcaaccggaagctaggtattttggct gtcatggacccatttaattcaacggatcgggaaaccaagcaaggagagtcaccaggaact gcttccgatctcaatcgtgggcacaaagatccgatctatgtcggaggattgccacgctct agaagttacagccatatttacagcaagcaccttaaaccaaccggactggagaatcaggga ttgttccgattcacggtatctttaggacacatgatgttgcagtctgaatttggcttcgtt gtgccaattttatgcctggcaagtgagtgcccagaggcccaaattctagatcgggatttc cacagggtgaaaacagaatatgtgaagcgaagaggtatgattaccatcgatgggaaggaa tctagcccagctttgggagatggtaactcactggatgttgaaggaaagctatatcttgga ggtttgcctttagactacactgccaggaaaataggaaatgcaacacacagtatccctgct tgtattggcaacgtgacattaaataacaagcccctgaacttggagaggccagtttccgtc cttactgtgagcaggtgttacacggctgtccaggagggcactttctttgatggcactgga tttgctgcactggtgaaagaaggttacaaagtgaggtcagatgtaattattacatttgag ttccgcagtacaacccgaaacgcggtactgcttggcatcagcagtgctaaggtggatgca attggattagagattgtaaatggcaaggttctgttccatgtaaataatggagctggaaga ataactgctagatatgaacccaaggattcaaaccagctgtgcaatgggaaatggcataaa cttcgagccaataagagcaagcatcgtattacactgactatggatggagtttctgtgcag gctgacaatccccatcttcagtcaacctcagcagacactaatgatccaatttatgtgggc ggttatcctgctaatgtgaaacagaattgcctgacccttcaagagccattccagggctgc ataaggaacctcaagctgacaaaagatcaacagatccaggcttttgacttcagcaaagcc tttgatctccgaggtgtcttccctcactcttgccctggcatcgaacactag

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