Rhincodon typus (whale shark): 109923094
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Entry
109923094 CDS
T06055
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04210
Apoptosis
rtp04517
IgSF CAM signaling
rtp04530
Tight junction
rtp04540
Gap junction
rtp04814
Motor proteins
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109923094
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109923094
09143 Cell growth and death
04210 Apoptosis
109923094
09144 Cellular community - eukaryotes
04530 Tight junction
109923094
04540 Gap junction
109923094
09142 Cell motility
04814 Motor proteins
109923094
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109923094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109923094
03036 Chromosome and associated proteins [BR:
rtp03036
]
109923094
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109923094
04147 Exosome [BR:
rtp04147
]
109923094
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109923094
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
109923094
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
109923094
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109923094
Exosomal proteins of other body fluids (saliva and urine)
109923094
Exosomal proteins of colorectal cancer cells
109923094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF7281
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
109923094
NCBI-ProteinID:
XP_048475836
LinkDB
All DBs
Position
44:complement(1664566..1713955)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECLSLHIGQAGVQLGNACWELYCLEHRIKPDGKMRTSKSGSAQDNSFNTFFSETGAGK
HVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEIVDLVLD
RIRKMADLCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSVYPAPQISTA
VVEPYNAVLVTHCTLEHSDCAFMVDNEAIYDICQHNLGIECPSYTNLNRLVAQIVSSITA
SLRFEGALNVDLTEFQTNLVPYPRIHFPLATYAPLMSKEENKNTQHSTLKITKACFKPDN
QMVKCSPHTGKYMACCMLYRGDVSVKEINTAIATIKSMRAISFVDWCPTGFKVGINHQAP
MVVPGSDLPRLTRAICMLSNTTAISSAWTRLNMKFDKLYAKRAFVHWYVGEGLEEGEFQD
SREDMASLERDYEEVGYDSSYLNELTERAE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgtctgtcactccacattggccaggccggtgtgcagctcgggaatgcctgc
tgggagctgtactgcctggagcatcggatcaagccggacggtaaaatgcgcacttccaag
tccggcagtgcccaagacaactccttcaacaccttcttcagtgagactggggcagggaaa
cacgttccccgggccgtgttcatcgatctggagcccactgtgattgatgaggtccgcact
ggcacctatcggcagctctttcaccctgagcagctcatcactggcaaggaggatgcagct
aataactacgcccggggccactgctccatcgggaaggagattgtggatctggtcttggat
cgaataaggaaaatggctgacctgtgcacagggctgcagggattcctcatcttccacagt
ttcgggggtggcactggttcgggtttcacttccctcctgatggagagactctccgtcgac
tacggcaagaaagccaagctggagttctccgtctaccccgctccccagatctccaccgcg
gtggtcgagccgtacaacgcagtgctggtcacccactgcaccctggagcactccgactgc
gccttcatggtggacaacgaagccatctatgatatctgccagcacaaccttggcatcgag
tgcccgagctacaccaacctcaaccgcctggtggcacagattgtctcgtccatcacggcg
tccctgcggttcgagggcgccctcaacgtggacctgacagagttccagaccaacctggtg
ccctacccacgcatccacttccctctggccacctacgcgccgctgatgtcgaaggaggag
aacaaaaacacccagcactccacgctgaagatcaccaaggcctgcttcaagccagacaac
cagatggtcaagtgcagtccccacactggcaagtacatggcgtgctgcatgctgtaccga
ggggatgtgtcggtaaaagagatcaacactgccattgccaccatcaagagcatgcgcgct
atcagcttcgtggattggtgcccgactggattcaaggttgggatcaaccaccaggctccg
atggtggtgccagggagtgacctgcccaggctgacccgtgccatctgtatgctgagcaac
accactgccatctcttcggcttggacccgcctgaacatgaagttcgacaagctgtacgcc
aagcgggcctttgtgcactggtacgtgggggaaggtctggaggaaggggagttccaggac
tcacgggaggacatggcctcactcgagagggattacgaagaggtgggatatgattccagc
tacctcaacgagctgacagagagggcggagtaa
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