KEGG   Rhincodon typus (whale shark): 109923094
Entry
109923094         CDS       T06055                                 
Name
(RefSeq) tubulin alpha-1B chain-like
  KO
K07374  tubulin alpha
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04145  Phagosome
rtp04210  Apoptosis
rtp04517  IgSF CAM signaling
rtp04530  Tight junction
rtp04540  Gap junction
rtp04814  Motor proteins
rtp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    109923094
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109923094
  09143 Cell growth and death
   04210 Apoptosis
    109923094
  09144 Cellular community - eukaryotes
   04530 Tight junction
    109923094
   04540 Gap junction
    109923094
  09142 Cell motility
   04814 Motor proteins
    109923094
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109923094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    109923094
   03036 Chromosome and associated proteins [BR:rtp03036]
    109923094
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rtp04812]
    109923094
   04147 Exosome [BR:rtp04147]
    109923094
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109923094
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     109923094
Cytoskeleton proteins [BR:rtp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    109923094
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109923094
  Exosomal proteins of other body fluids (saliva and urine)
   109923094
  Exosomal proteins of colorectal cancer cells
   109923094
SSDB
Motif
Pfam: Tubulin Tubulin_C DUF7281 Tubulin_3
Other DBs
NCBI-GeneID: 109923094
NCBI-ProteinID: XP_048475836
LinkDB
Position
44:complement(1664566..1713955)
AA seq 450 aa
MRECLSLHIGQAGVQLGNACWELYCLEHRIKPDGKMRTSKSGSAQDNSFNTFFSETGAGK
HVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEIVDLVLD
RIRKMADLCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSVYPAPQISTA
VVEPYNAVLVTHCTLEHSDCAFMVDNEAIYDICQHNLGIECPSYTNLNRLVAQIVSSITA
SLRFEGALNVDLTEFQTNLVPYPRIHFPLATYAPLMSKEENKNTQHSTLKITKACFKPDN
QMVKCSPHTGKYMACCMLYRGDVSVKEINTAIATIKSMRAISFVDWCPTGFKVGINHQAP
MVVPGSDLPRLTRAICMLSNTTAISSAWTRLNMKFDKLYAKRAFVHWYVGEGLEEGEFQD
SREDMASLERDYEEVGYDSSYLNELTERAE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgcgagtgtctgtcactccacattggccaggccggtgtgcagctcgggaatgcctgc
tgggagctgtactgcctggagcatcggatcaagccggacggtaaaatgcgcacttccaag
tccggcagtgcccaagacaactccttcaacaccttcttcagtgagactggggcagggaaa
cacgttccccgggccgtgttcatcgatctggagcccactgtgattgatgaggtccgcact
ggcacctatcggcagctctttcaccctgagcagctcatcactggcaaggaggatgcagct
aataactacgcccggggccactgctccatcgggaaggagattgtggatctggtcttggat
cgaataaggaaaatggctgacctgtgcacagggctgcagggattcctcatcttccacagt
ttcgggggtggcactggttcgggtttcacttccctcctgatggagagactctccgtcgac
tacggcaagaaagccaagctggagttctccgtctaccccgctccccagatctccaccgcg
gtggtcgagccgtacaacgcagtgctggtcacccactgcaccctggagcactccgactgc
gccttcatggtggacaacgaagccatctatgatatctgccagcacaaccttggcatcgag
tgcccgagctacaccaacctcaaccgcctggtggcacagattgtctcgtccatcacggcg
tccctgcggttcgagggcgccctcaacgtggacctgacagagttccagaccaacctggtg
ccctacccacgcatccacttccctctggccacctacgcgccgctgatgtcgaaggaggag
aacaaaaacacccagcactccacgctgaagatcaccaaggcctgcttcaagccagacaac
cagatggtcaagtgcagtccccacactggcaagtacatggcgtgctgcatgctgtaccga
ggggatgtgtcggtaaaagagatcaacactgccattgccaccatcaagagcatgcgcgct
atcagcttcgtggattggtgcccgactggattcaaggttgggatcaaccaccaggctccg
atggtggtgccagggagtgacctgcccaggctgacccgtgccatctgtatgctgagcaac
accactgccatctcttcggcttggacccgcctgaacatgaagttcgacaagctgtacgcc
aagcgggcctttgtgcactggtacgtgggggaaggtctggaggaaggggagttccaggac
tcacgggaggacatggcctcactcgagagggattacgaagaggtgggatatgattccagc
tacctcaacgagctgacagagagggcggagtaa

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