Rhincodon typus (whale shark): 109923234
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Entry
109923234 CDS
T06055
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109923234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109923234
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
109923234
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
109923234
NCBI-ProteinID:
XP_048475933
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All DBs
Position
45:complement(6113178..6138094)
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AA seq
492 aa
AA seq
DB search
MGVLWLAVRLQVLLLMVTRAGVSASETEKRLLNKLFDSYNPNVRPAQTADEKVTVRVGMT
LSQLISLNEKDEEMTTNVFMNLAWMDYRLRWDPKNYDGIDVLRIPCSKVWLPDIVLLNNN
DGNFHVALLVNVLVQHNGIVSWLPPAIYRSSCAIRVKYFPFDWQNCTMVFKSYTYDTSEV
ILEHSLDDSGRHEIREVIIDKNAFTENGEWQIWHKPSRKNTLSHDPSYEDITFYLIIQRK
PLFYIVNIIIPCVLISILAILVFYLPPDAGEKMTLSISVLLALTVFLLLLADKVPETSLG
VPIIVNYLMFTMILVTFSVILSVVVLNLHHRSPNTHAMPYWVKQIFIQVLPRYLWIQRPK
LEASESEKRVALSRVIDEYFIRKPAMDLNNMRVDLPPSHLFPEINRYINGIVHQVVLPPD
LKAAVEAIKYIAKELQGQEEYDKLKEDWQYVAMVVDRLFLWVFITFTSLGTLAIFLDASY
NVPPVDPFDPLT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggggttctatggctggcagtcagacttcaagtcctcttgctcatggtcacgagggca
ggtgtcagtgcctctgagacggagaagagacttctcaacaagttgtttgactcctacaat
cccaatgtgcggcctgcgcagacggcagatgagaaagtgacagtgagagtggggatgacc
ctctcacagctgatcagcctgaatgaaaaggatgaggaaatgaccacaaatgtcttcatg
aatctggcctggatggattatcgattgaggtgggacccgaagaattatgacggcattgat
gttcttcgaattccctgcagcaaagtgtggctgcctgacattgtgctactgaacaacaat
gatggcaatttccatgtggcactccttgttaatgtgctggtacagcacaatggcattgtc
agctggctccctcctgccatctaccggagctcctgtgccatcagagtgaagtacttccca
tttgattggcagaactgcaccatggttttcaaatcttacacgtacgatacatctgaggtg
atcctggagcactccctggatgattcggggaggcacgagatcagagaggtgatcattgac
aagaatgcctttaccgagaacggcgagtggcaaatctggcacaagccttcacgcaagaac
acgctgagccacgacccaagctatgaggacattaccttttatctcatcatccagcgcaag
cccctcttctacattgtcaacatcatcataccctgcgtcctcatcagtatcctggccatc
ctggtcttctaccttcctcctgacgcaggtgagaagatgactctgtcaatctccgtgctg
ctggcactcactgtcttcttgctgcttctggctgacaaggtcccggaaacctcactggga
gttcccatcattgtcaactacctgatgttcaccatgatccttgtcaccttctcagtcatc
ctcagcgtggttgttttaaaccttcatcatcgctctccaaacacacacgccatgccctac
tgggtcaaacagattttcatccaagtgttacccaggtacctctggatccagaggcctaaa
ctggaggcctcagagagtgagaaacgtgttgctctgagccgtgtaatagacgaatatttc
atccgaaaacctgccatggacttaaacaacatgagagtggatttgcccccaagccacctg
ttccctgagataaacagatacataaatggcatcgtccatcaagtggtattgcctccagat
ctgaaagcagcagtggaggccatcaagtacattgccaaggagctgcaggggcaagaggag
tacgacaagctgaaggaggactggcagtacgtggccatggttgtcgacaggctgttcctc
tgggtcttcatcaccttcacctcattggggacgcttgccatcttccttgatgccagctac
aatgttccacctgtcgatcccttcgaccctttgacctaa
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