Rhincodon typus (whale shark): 109923240
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Entry
109923240 CDS
T06055
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00510
N-Glycan biosynthesis
rtp00513
Various types of N-glycan biosynthesis
rtp01100
Metabolic pathways
rtp04141
Protein processing in endoplasmic reticulum
Module
rtp_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
109923240 (rpn2)
00513 Various types of N-glycan biosynthesis
109923240 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109923240 (rpn2)
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Motif
Other DBs
NCBI-GeneID:
109923240
NCBI-ProteinID:
XP_020378873
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Position
19:complement(18615910..18666415)
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AA seq
642 aa
AA seq
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MGAAGTGTLFTLALLAITQAATVKHYLSDSDIERLAQTLKQPYINLENAYYTIVGLQKLG
DQVPDEQAACNFLKSQVDSRNVDSLFYAAEASQALSNCEIKVSNETRDLLLAAVSDDSSI
TQIYHAVGALSNFGLPVASRDVLAALSAHISKDDGSLGIIHALFAASYLSQQANLRSILE
EIEDLVARLDDLGGIYLQFEEGLETTALFVGAAYKLSDHAGTEPAIKEDQVIQLVNAVFS
KKHFTTMSEAFSIACAAAALSHNQYHIPIIVVAEGIASVSHKKPNLKLRVTNILSESLTS
ADVQLENAKSTLTKNTVLQQTSFALKGDIFELNFMEIKPPSGYYDFSINVEGDSRFIGNH
IEIKVKVATEVDITNVDLSVVDRDQSISPKTTRVTYPSKAKGLITADSHQSFALSFQLTD
VNTGTELTPHQTFVRLYNQKTDQEVVFVAEPDSKKVYKFDLDVAERKSEFNSVSGTYSLF
LIIGDATIENPILWHLADVAIKFPDEEAPTPVQTQNVFAPKPEIQHLFREPEKKPPIAVS
NTFTALVLAPLLLLIILWIKLGVNISNFTFSPSTIIFHLGHAGMLGLMYVYWTQLNMFQT
LQYLAILGSITFFAGNRMLAQKAVKRIAAEQSSRLAKYRTLR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagcaggtacagggactctgttcaccttggctttgttagccattacacaagct
gccactgttaaacactatttgtcagattctgatattgaaagattagcgcaaactttaaaa
caaccttatattaatttggagaatgcctattacaccatagttggcttgcaaaagcttggg
gatcaagtaccagatgaacaggccgcttgcaactttttgaaatcacaagtagattccaga
aatgttgattctcttttctacgctgctgaagcaagtcaagccctctctaattgtgaaatt
aaagtcagcaatgaaactcgagatctcttgttggcagctgtgagcgatgattcttcaatt
acccagatttaccacgcagttggagctttgagtaattttggccttcctgtggcatctcgg
gatgttcttgcagccctttctgctcacatttctaaggatgatggatccttgggaattatc
catgcattgtttgcagcttcttacctatctcagcaggctaatctaaggagcattctggaa
gagattgaggatctggttgcacgtcttgatgatttgggaggcatttatcttcaattcgaa
gaaggattagaaacaactgcattgtttgtgggtgcagcatataagctttctgaccatgct
ggaacagagcccgcaatcaaagaggatcaagtcattcagcttgttaatgctgtattcagt
aagaaacattttaccacaatgtccgaggctttcagcattgcctgtgctgctgcagctttg
tcccataatcagtaccatattccaatcattgtggtagctgaaggaattgcttctgtttcg
cacaagaagcccaacctaaagttgcgtgtgacaaatattttgtctgagagtctgacttca
gctgatgttcagcttgaaaatgccaagtctactttgacaaaaaacacagttcttcagcaa
acatcctttgctttgaaaggtgatatctttgaattaaattttatggagataaagccacca
agtggatattatgacttttctatcaatgtggagggtgatagccgatttataggaaaccac
atcgagatcaaagtcaaggttgccactgaagtcgatatcactaatgttgacctctcagta
gttgacagggatcaaagcatttcaccaaagaccaccagggtgacttatccgtcaaaagcc
aaggggcttattactgctgacagtcaccagagctttgcgttatcattccaattgacagac
gtgaatactggcactgagcttactccacatcaaacttttgtacgtctctacaatcagaag
actgatcaggaggtcgtatttgtggctgaaccagatagtaaaaaagtgtacaagtttgac
ctagatgtggcagagagaaaatctgaatttaattcagtttctggaacctattcccttttt
ttgatcattggagatgcaacaattgaaaacccaattctctggcacctggctgatgttgca
attaagtttcctgatgaagaggctccaactcctgtgcagactcagaatgtctttgccccc
aagcctgaaattcagcacctgtttcgagagcctgaaaagaagccacccattgcagtctca
aatactttcactgcccttgttctagcacccctcttactgcttataattctgtggatcaaa
cttggtgtcaacatctctaatttcaccttttctccgagcaccattatcttccatttgggc
catgctggaatgttgggactcatgtatgtatactggactcaactgaacatgtttcagacc
ctgcagtatcttgctatacttggcagcatcacattctttgctggaaacagaatgttagct
cagaaggcagtaaaaaggattgcagcagaacaaagcagtagattggcaaaatataggact
cttcggtaa
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