Rhincodon typus (whale shark): 109923254
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Entry
109923254 CDS
T06055
Name
(RefSeq) junction plakoglobin-like
KO
K10056
junction plakoglobin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04382
Cornified envelope formation
rtp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109923254
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109923254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109923254
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109923254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Adaptin_N
ARMC9_ARM
Cnd1
HEAT_2
Arm_2
HEAT_EZ
IL4
Germane
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
109923254
NCBI-ProteinID:
XP_048470588
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Position
30:36316814..36386836
Genome browser
AA seq
739 aa
AA seq
DB search
MESYDSEAVSKVTQWQSYIDSGIHSGMNTNVPSLSGKGNPEDDEILKQGSYTVTTTTYTA
TQIPDMEEQLASTRGQRVRAAMFPETLETGTRILSTQIDPGQETNVQKLSESSQMLKAAI
VQLINYQDDAELATRAIPELTKLLNDEDQVIVSKATMIVNQLSKKDASCRALEQSSQMVA
AVVRTMQNTSDMETVRCAAGILHNFSHHRDGMLAIFKSGGIPALVRMLSSPVESILFYAI
TTLHNLLLHQEGAKMAVRLADGLQKMVPLLKKNNVKFLAITTDCLQLLAYGNQESKLIIL
ANGGPDALVHIMRTYNYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGYHLGSSSPR
LVQNCLWTLRNLSDAATKQEGLDPLLSTLVQLLASDDINVLTCATGILSNLTCNNARNKM
VVCQVEGIEALVHTVLRAGDKEDITEPAVCALRHLTSRHPDAEIAQNKVRLKYGIPGVIR
LLNQPFHWPLIKATVGLVRNLALCPSNHGPLRESGVIPQLVQLLVKAHHETQRQASGGGQ
QQYMDGVRMDEIVEGCTGALHILARDSNNRADITRLNTIPLFVQLLYSPVENIQRVAAGV
LCELAQDREAAEEIDQEGAPAPLTEMLHSMNEGIATYAAAVLFRISEDKPQDYRKRLSVE
LTNTLFRNDPEAWDAAERLMVADTCHDAFLPPPENEIDRRYGNPEGELEMDHELIASDGL
YSMDRHGMLSDEPMNSYPC
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggagagttatgactcagaggctgtcagcaaggtgactcagtggcagagctacattgat
tctggcattcactcaggaatgaacaccaatgtcccctccctaagtggcaaaggcaaccct
gaagatgatgaaatattgaaacagggaagttacacagtcacaaccaccacctacacagcg
acccagataccagatatggaagagcaactggcctccacccgtgggcaacgtgtgcgtgct
gccatgtttccagaaaccctggagactggcactcgtatcctgtccacccagatagaccct
ggtcaggagacgaatgtgcagaaactgtcagaatcctcacagatgctgaaagctgccatt
gtacagctcatcaattaccaagatgatgcagagcttgcaacgcgggctattcctgaactc
accaaacttctcaacgatgaggaccaggttattgtcagcaaggcaaccatgatagtgaac
cagctgtcaaagaaagatgcttcatgtcgagctctggagcagtcgtcccagatggttgca
gcagttgtccgcaccatgcagaatacgagcgacatggaaacagttcgctgtgcagctggc
atcttgcacaacttctctcatcaccgtgacggcatgctcgccatcttcaaatcaggcggg
attcctgcactggtcaggatgctcagctctcctgttgaatccatcctgttctatgccatt
acaaccctccacaatctgcttctgcaccaagagggggcaaagatggcggtccgtttggct
gatgggctccagaagatggttcctctgttgaagaagaataacgtgaagtttctcgccatc
accacggattgcctgcaactgctggcttacggcaaccaggagagcaagctgattatcctg
gctaatggaggccctgatgcccttgttcatatcatgaggacctacaattacgagaagctg
ctgtggaccacaagccgtgtcttgaaagttttatctgtctgtcctagcaacaagccggca
attgtggaagctggtgggatgcaggctctgggttatcacctgggcagctccagccccagg
ctggttcagaactgtctctggacgctgaggaatctctctgatgcagcaacaaaacaggaa
ggattagatcctcttctctccacactggtccagctgttggcttcagatgacattaacgtg
ttgacctgtgctactggtattctttcgaatctgacctgcaacaatgccaggaacaagatg
gtggtctgccaggtggaaggcattgaggccctggtccacacagtactgagagcgggtgac
aaggaggacatcactgaaccagctgtctgtgctctccgccacctcaccagccgacaccct
gatgctgagattgcccagaataaagtgcgcttaaagtatggtatccctggagttatcagg
cttctgaatcagcccttccactggccactgatcaaggccactgttggactggttcgtaac
ctggcactgtgcccgtctaaccatggtcctctccgtgagagtggtgtcattcctcaactt
gtccagctcctggtgaaagctcaccatgaaacacagcgtcaagcttctggaggtggacaa
cagcaatacatggatggagtacgaatggatgagattgttgaaggctgcactggagcacta
cacattctggctcgggattccaacaaccgtgctgacatcactcggctaaacacaatccca
ctgtttgttcagctcctgtactctccagttgagaatatccagcgtgtggctgctggggtt
ctctgtgaacttgcacaggaccgagaagcagcagaggagatagatcaagagggagcccca
gcacccctcactgaaatgttgcactccatgaatgagggaatagccacctatgctgctgca
gtgctcttccggatatcggaagacaaacctcaggattaccggaagcgactgtctgttgaa
ttgaccaacactctgtttcgaaatgacccagaggcctgggatgccgctgagcggctgatg
gttgcagatacctgtcatgatgcattcctccctcctcctgagaatgaaattgaccggcgt
tatggaaatccagagggtgagttggaaatggaccatgagttgattgcttctgatggactg
tactcaatggacagacacgggatgttgtcggatgagccaatgaattcgtatccatgctag
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