Rhincodon typus (whale shark): 109923263
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Entry
109923263 CDS
T06055
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04110
Cell cycle
rtp04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109923263
04114 Oocyte meiosis
109923263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109923263
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109923263
Meiosis-specific proteins
Cohesin complex and associated proteins
109923263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_hinge
SMC_N
AAA_21
CENP-Q
Motif
Other DBs
NCBI-GeneID:
109923263
NCBI-ProteinID:
XP_048475882
LinkDB
All DBs
Position
44:complement(172634..203537)
Genome browser
AA seq
1080 aa
AA seq
DB search
MVHEAGVCRVWCGTCDDQIRKSASTQLKQARENVTGSPHLILVVHCFAPPSCQAERYQRL
KDELARAQVQLQLFKLYHNESEIERLSKDLTSRNKEIEKDKKRMDKVEEEMKVQKKEVGK
LIREQQQIEKEIKEKDAELNQKRPQYIKAKENTSHKIKKLESAKKSLQNAQKQYKKRKAD
MDELDQEMLSVEKARQEFEERMEEESQSEGRDLQLEENQVKKYHRLKEEASKRAATLAQE
LEKFNRDQKADQDRLDLEERKKVETEAKIKQKVREIEENQKRIEKLEDYINTSKQSLEEQ
QAQEAKLTEEVEAAKRRIDEINMELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYP
GSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDTEKTGRDCIQYIKEQRGEPETFLP
LDYLEVKPTDEKLRELRGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFGG
PQRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVEKLKSKKEKLTEELKEQMKIK
RKEAELRQVQSQAHGLQMRLKYSQSDLDQTKTRHLSLNMQEKSKLESELANFGPKINDIK
RTVQARDREMKELKEKMNQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFEN
QKTRLGIQLDYERQQLKEDQDKVHMWEQTVKKDENEIEKLKKEEHRHMKIIDETMAQLQD
LKNQHLAKKSEVNDKNHEMDDIRKKLGGATKEMTQLQKEVTAIETKLEQKRSDRHNLLQS
CKMQDIKLPLRQGSMDDISQEEGELQSEDTGNSSQRTSNVCAREAMIEIDYSELSEDLKD
TLAEDEVKIELNSLQQKVTEHQNILQRIAAPNMKAMEKLDSVRDKFQETSEEFEAARKRA
KKAKQAFEQIKKERFDRFNACFEAVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGIN
YNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVAN
YIKEQSMSNFQAVVISLKEEFYTKADALIGVYPEQGDCVISKVLTFDLTGFPEAGPSPNE
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgaggctggtgtttgtagagtgtggtgtggaacttgtgacgaccagattcgg
aagagtgcgtccacccagctaaagcaggcacgtgagaatgttactgggtctcctcacctg
atccttgttgttcactgttttgctcctccttcctgtcaggcggaacgttaccagcgtctg
aaggatgaactggcccgcgcgcaggtccagctgcagctcttcaagctctaccacaacgaa
tcagagatcgagcggttgagcaaagacctcacctcccgcaataaggagatcgagaaggac
aagaaacgcatggacaaggtggaggaggagatgaaggtgcagaagaaggaagttggcaag
ctgatcagggagcagcagcagatcgagaaggaaattaaggagaaggacgcggaattgaac
cagaaacgaccgcagtacatcaaggccaaggagaacacgtcgcacaagatcaagaagctg
gagtccgccaagaagtcactgcagaacgcgcagaagcagtacaagaagcgcaaggcggac
atggacgagttggatcaggagatgctgtcagtggagaaggcccggcaggagtttgaggag
cgcatggaggaggagagccagagcgaaggacgggatctacagcttgaggagaaccaggtg
aagaagtaccaccggctgaaggaggaggccagcaagcgagcagccaccctagctcaggag
ctggagaagttcaaccgggatcagaaggctgaccaggaccggctggacttggaggagagg
aagaaagtggagacagaggccaaaatcaagcagaaggtccgagagattgaagagaatcag
aagaggattgagaagttggaagattacatcaacaccagcaagcagtcgctggaggagcag
caggcgcaggaggccaagctgaccgaggaggtggaggcagcgaaacggcgcatcgatgag
attaacatggagctgaatcaggtcatggaacagctaggtgatgctcgcattgaccggcag
gagagcagtcgccagcagcgtaaggcggagatcatggagagcattaaacgcctctaccca
ggctctgtgtatggccgtctgattgatctgtgtcagcccacacagaagaaatatcagatt
gctgtcaccaaggtactcgggaaaaacatggacgccattattgtggacacggagaagact
ggcagggactgcatccaatacatcaaggagcagcggggggagccggagaccttcctgcct
cttgactacctagaggtaaagcccactgatgagaagctccgggagctgcggggggctaaa
ctggtgatcgatgtcatccgttacgagccaccacacattaagaaagctctacagtacgcc
tgtgggaatgcactcgtgtgcgacaatgtggaggatgccaggagaatcgcttttgggggt
ccgcagaggcacaagaccgttgccttggatggaaccctgttccagaaatccggtgtgata
tcaggcggtgctagtgacctgaaggccaaggcccgtcgctgggatgagaaggcggttgag
aagctgaagagcaagaaggaaaagctgaccgaagagctgaaggagcaaatgaagataaaa
cggaaggaggccgaactgcggcaggtgcagtcgcaggctcacgggctccagatgagattg
aagtattcacagagtgacctggatcagaccaaaacccgacatctttcactgaacatgcag
gagaaatccaagctggagagtgagctggcaaactttggaccgaaaataaatgacatcaaa
cgcacagtgcaggcccgggaccgtgagatgaaggagctgaaagagaagatgaaccaggtt
gaggatgaggtgtttgaggaattctgtcgagaaatcggggtaaggaacatcagggagttt
gaagaggagaaggtgaaaaggcagaacgagatagccaagaagagactggagtttgagaac
cagaagacaagactgggcatccagctcgactacgagcggcaacagctgaaggaggaccag
gataaagtgcacatgtgggaacaaacggtgaagaaggacgagaatgagattgaaaaactg
aaaaaggaggagcacaggcacatgaagatcattgacgagaccatggcccagctgcaggac
ctgaagaaccagcaccttgccaaaaagtcagaggtcaacgacaagaaccacgagatggac
gacattcgcaagaagctcggaggggccaccaaggagatgacccagctccagaaggaagtg
actgctatcgagaccaaactggaacagaagcgcagcgaccggcacaacctgctgcagagc
tgtaagatgcaggacatcaagctgcccctgcgccaggggagcatggacgatatcagtcag
gaagagggtgaattgcagtccgaagacacgggaaacagttcgcagaggacctcgaatgtg
tgcgcacgggaggccatgattgagatagattacagcgagctgtccgaggatctgaaggat
acgttagcagaagacgaggtcaagatagagttgaacagcctgcagcagaaggtgacagag
caccagaacatcctgcaacggattgctgcacccaacatgaaggccatggagaagctggat
agcgtgcgggataaattccaggaaacctcagaagagtttgaggcggcaaggaaacgagcc
aaaaaagcaaagcaggcctttgagcagatcaagaaagagcgctttgaccgcttcaacgcc
tgtttcgaagccgtggccacgaatatcgatgagatttacaaggctctctcgcggaacagt
agcgcgcaggcattcttgggcccggagaacccggaagagccgtatctggatgggatcaac
tacaactgtgtggctccaggcaagcggttcaggcccatggataacctgtctggaggggag
aagacagtggcggccttggcgctgttgtttgccatccacagctataagccagccccgttc
tttgttctggatgagattgatgctgccctcgacaatacaaacattggaaaggttgccaac
tacatcaaggagcagtccatgtctaactttcaggctgtggtcatttccctaaaagaggaa
ttctacaccaaggctgacgctctcattggtgtctaccctgagcaaggggactgcgtcatc
agcaaagtgctgaccttcgacctgactgggttcccagaggctggcccatcacccaatgag
taa
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