Rhincodon typus (whale shark): 109923284
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Entry
109923284 CDS
T06055
Name
(RefSeq) vascular endothelial growth factor D isoform X1
KO
K05449
vascular endothelial growth factor C/D
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04020
Calcium signaling pathway
rtp04510
Focal adhesion
rtp04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109923284
04020 Calcium signaling pathway
109923284
09133 Signaling molecules and interaction
04518 Integrin signaling
109923284
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109923284
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109923284
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Growth factors (RTK binding)
109923284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
CXCXC
Shell_matrix-like_N
Motif
Other DBs
NCBI-GeneID:
109923284
NCBI-ProteinID:
XP_048459313
LinkDB
All DBs
Position
11:complement(71808716..71837935)
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AA seq
327 aa
AA seq
DB search
MKLPSSTCLHVIVLSLLHLLQGVYDERDSRLKQKRASLEQQIRAVSNVRELLSIINSSDW
KRWKCHQKLKYLAGFDTRSRSTRFASPYYDADTLKSIDDEWQRTQCVPRESCVDVAKELG
RSTNTFFKPPCVSVYRCGGCCNEESLVCKNTSTSYIRKELFEIAIPLTNIPELLTVRIAN
HTSCKCISSRHAYSIIRRSILTHEDYSCLYDENHCSRGLVWDKEKCHCVTSTVQREDELS
PIAELAICGPYMEFNEELCDCVCRNMESHETCSQKQKVFDPDSCSCVDRPACSYHSRSCA
AGKVFNDKHCQCVWKDKHSRSTQKEGD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccatccagtacctgtctacatgtcatcgttttgtcacttctccatcttttg
cagggtgtttacgatgaacgtgactccagactgaagcagaagagggcaagtttagagcaa
cagatccgagctgtttccaacgtgagggaattgctgtcaattattaattcctcggattgg
aagcggtggaaatgccaccaaaaattaaaatacctggccggctttgacacacgatcgcgg
tcaaccaggttcgcttctccatactacgatgccgacacgctcaaatctatcgatgacgaa
tggcagaggactcagtgtgtccccagggaatcctgcgtcgacgttgctaaggagcttgga
cgtagcactaatacattcttcaagcctccgtgtgtttccgtgtatcgatgcggtgggtgc
tgcaatgaagagagcctggtttgcaagaacaccagcacgtcctacatccgcaaagagctc
ttcgagattgccattcctctgaccaatataccagagctattgactgtcagaattgcaaac
cacacttcttgcaaatgcatctccagtcgacatgcttattccatcattcgaagatcaatc
ctcacacatgaagactacagctgtctgtatgatgaaaatcactgctccaggggcctggtc
tgggataaagagaaatgccactgtgtcacctccaccgttcaaagagaagatgaactctct
cccattgcagagctggccatctgtgggccttatatggaattcaacgaggaactgtgtgat
tgtgtatgcaggaacatggaaagtcatgaaacttgctcgcagaaacaaaaagtgtttgac
ccggattcctgcagttgtgtggatagacctgcctgtagttaccacagcagatcctgtgct
gcggggaaggtcttcaatgataagcattgccagtgtgtgtggaaggataaacattcacgt
agtacacagaaggaaggtgactga
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integrated database retrieval system
