Rhincodon typus (whale shark): 109923434
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Entry
109923434 CDS
T06055
Symbol
ubqln4
Name
(RefSeq) ubiquilin-4 isoform X1
KO
K04523
ubiquilin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109923434 (ubqln4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109923434 (ubqln4)
03051 Proteasome [BR:
rtp03051
]
109923434 (ubqln4)
Membrane trafficking [BR:
rtp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
109923434 (ubqln4)
Proteasome [BR:
rtp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109923434 (ubqln4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
UBA_7
Ubiquitin_5
UBA_HOIP
UBA_NBR1_C
Rad60-SLD_2
CUE
Motif
Other DBs
NCBI-GeneID:
109923434
NCBI-ProteinID:
XP_048476298
LinkDB
All DBs
Position
46:complement(6463532..6488458)
Genome browser
AA seq
583 aa
AA seq
DB search
MMEYLHVIYSNFFSLSLFSLQFKNEISKRFKAKQEQLVLIFAGKILKDGDTLNQHGIKDG
LTVHLVIKTAQRLQDPSTQPSTSSSAPSTEETSTRPEPPTGTVTSTSSVPSTATPTGTST
SSPSVLSGFGGIPGLGSLGMGSANFMELQQQMQRQLMSNPDMLAQIMENPFVQNMMSNPD
LMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLE
SIPGGYNALRRMYTDIQEPMFSAAREQFGGNPFTALGGGSDSNAQPSRTENREPLPNPWV
PTSPASPATGSSSEGGNSTNQTTQPVSNPFGINAGTLGNGMFNSPGMQSLMQQISENPQL
IQNMLSAPYMRSMMQSLSQNPDLASQVILMNNPLFAGNTQLQDQLRLQMPVFLQQMQNPD
VLSVMTNPRAMQALLQIQQGLQTLQNEAPGLLPGFSPAAPGSVGGVGGLGSLSSGSTPTT
TAASSAAPTTQSTGGINTSPESPASVGPGAGASNPQQQLMQQMLQMLAGANTQVQNPEVR
FQQQLEQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatatttgcatgtcatttattctaattttttttccctctctctcttctccctt
cagtttaaaaatgaaatctccaaacgattcaaagctaaacaggagcagttggttctcata
tttgcagggaagatactgaaggatggagatacactcaaccagcacggcattaaagacgga
ctcaccgtgcatcttgtaataaagacagctcagaggcttcaggatcccagcacacaaccc
tctacgtcatccagtgcccccagcaccgaggagaccagcacgagaccggaacctcccaca
ggcaccgtcaccagcacgagcagtgtgcctagcactgcaaccccaacaggaacgtctacc
tcctccccatctgtattatctggtttcggtggtatcccgggcctcgggagtctgggtatg
ggctcagcaaatttcatggagctgcagcagcagatgcagcggcagctaatgtcgaaccca
gacatgctagcacagatcatggagaacccttttgtacagaacatgatgtcgaacccggac
ctgatgagacagatgatcatggccaacccgcagatgcagcagctgatggagaggaacccc
gagatcagccacatgttgaacaatcccgagcttatgagacagacgatggagctagcccgc
aacccagccatgatgcaggagatgatgaggaatcaggatcgggcgctcagcaacctcgag
agcatccccggtggctacaatgccctgcgacgcatgtacactgacattcaggagcccatg
ttcagcgcagccagagaacagtttggcggtaacccgttcacagcattgggaggaggctcc
gacagcaacgcccaaccgtcccgaactgagaatagggagcccttaccgaatccctgggtc
ccgacgtcaccagcctccccggctaccggctcaagtagtgagggagggaacagcacaaac
cagacgacacagcctgtatcgaaccccttcggtattaacgctggaaccctcgggaacgga
atgttcaacagcccggggatgcagagcctaatgcaacagatctcagagaacccacagcta
atacagaacatgctgtcggcgccgtacatgaggagcatgatgcagtccctgtcccagaat
cctgacctcgcctcacaggtaatcttgatgaataaccccttgtttgctggcaacacacag
ctgcaggatcaactccgtctccagatgcctgtcttcttgcagcagatgcagaatcctgat
gtgttgtcggtgatgaccaacccccgggccatgcaggctttgctccagatccaacagggt
ttgcagacgctgcagaacgaagcaccaggactcctgccaggattcagtcccgctgctcct
ggttccgtcggcggagtgggtgggctcggaagtcttagcagtggctcgacgcccacgacg
acggcggcatcgtcagcggcacccaccacgcagagcactgggggcatcaacaccagtccg
gagagcccggcatccgtgggccctggggctggggccagcaacccacagcagcagttgatg
cagcagatgttacagatgttagcaggggctaacactcaagtacaaaaccctgaagtgcga
tttcagcagcaactggagcagctcagcgcgatgggtttcattaaccgtgaggccaacctt
caggcactcatagccactggaggtgacataaacgctgctatcgagagacttctgggctcg
cagccctcttaa
DBGET
integrated database retrieval system
