Rhincodon typus (whale shark): 109923458
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Entry
109923458 CDS
T06055
Name
(RefSeq) plakophilin-3
KO
K28841
plakophilin 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04382
Cornified envelope formation
rtp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109923458
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109923458
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GFIT
Motif
Pfam:
Arm
ZER1-like_2nd
ARM_ARMC5
HEAT_GCN1
DUF4843
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
109923458
NCBI-ProteinID:
XP_048463247
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All DBs
Position
17:complement(8396195..8432803)
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AA seq
691 aa
AA seq
DB search
MNVTQESYFLKSALPTDAPVSTLAMPSDTQLDRREHRAEQKSMRVQEQVRTMLRSSSNSS
RVSSVYGGSVSGDSFGMMRYPVATMPSYGSKSQAFVTDRKYSTTKPSVYKQGTSQNWSSR
SAVGDYSFKGATTGDQYFRQREETVSHYRPISFHQTSRPQSFHQSATYRHVNQGLMDQQD
IDNLSLHSMHLPGKHAEIVRKKSWSAAQMNGQAIYQRADDGETNLVLDQVDNGYSSSHGR
NGLSSSSYTMSHMVSKSPAKQMNSMTTSLPRSLSGSVGMASYSVEGMEEMSDRRQIRPPA
QRTLQRVQQSNKVIRGRTGSGSYSTSQMIRTPSLRSLGRADVGVRELGEQELEAARLDAL
QMAQLSRSDNLDLPTAVNLLDSSDVNNQVIGAGYIQHECYHDAGAKEHAYNLKAIPKLVK
LFNHDALEVQRSATAAMRNLIYNNTTNKQELVKQNGIPKMMQAIKVIDEELKANITGILW
NLSSSENLKSTLARDTLEKITEEILAPSSGWSSSVSIRPLASEDEVFYNTTGYIRNLSSG
KEDTRQKMRECKGLVDSLVYFIQQSLDNNAASKSVENSACVLRNLSYRLYEEMPSFYQNR
LEGPGRNNRSVKKGDVVGCFTPQSRKVKEINTESAIFSEVTKDPKGIEWLWNPAIVTVYI
GLLDKSEANQQTTEAALGALQNITAGDFREG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacgcaggagagttatttcctcaagtccgccttgcccacggacgccccggtc
tctaccttggctatgccctcggacacacagctcgaccgcagggagcaccgcgccgagcag
aagagcatgagagtgcaggagcaagtccgaactatgctccggagtagtagcaacagtagc
cgggtcagttcagtgtacggaggctctgttagtggagattcttttggaatgatgagatat
ccagtggcaaccatgccaagctacggttccaaatctcaagcttttgtaactgacagaaag
tactctactaccaagccgtccgtgtataaacaggggacgagtcaaaactggtcctctcgt
tcagctgtgggggattactcctttaaaggggcaaccacaggagatcaatatttcaggcaa
agagaggagactgtttctcactacagacccatttcatttcatcagacttccagaccacag
tcctttcatcagtccgcaacctacagacatgtgaaccaaggactaatggatcagcaggac
attgacaacttgtcactacattcgatgcacttgcctggcaaacatgctgagattgtgagg
aagaaatcttggtctgcagcacaaatgaatggacaggccatttaccaaagagcagatgat
ggagagaccaacttggtcttggatcaggttgataatggctattcatcctcacatgggcgt
aatggccttagcagcagcagctacaccatgagccacatggttagtaaatctccagctaag
caaatgaatagcatgactacgagcctgcccagatccttaagtggctcagtgggcatggct
agttactcagtggaagggatggaagagatgtctgaccgtcgacaaatcagacccccagct
cagcgcactttgcaaagagtccagcaaagcaacaaagtaattcgaggaagaacaggttcg
ggttcctactcaacctcgcaaatgatacgcactccatcccttcgcagcttgggcagagca
gatgtcggtgtccgagaattgggagagcaagagttagaagcggcgaggcttgatgcgtta
caaatggcacagctgagccgatctgacaatttggatctgccgaccgccgtcaaccttctg
gattcttctgacgtgaacaatcaagtgatcggagctggatacatccaacatgaatgctac
catgatgcgggtgctaaagagcatgcttataacttgaaggcgatccctaagcttgtgaaa
ctcttcaatcacgatgcattggaagtgcaacggagtgccacagcagcaatgcgcaacttg
atctataacaacaccacgaacaaacaggagctggtcaagcagaatggaatccccaagatg
atgcaggcaatcaaagtcattgatgaagaactgaaggccaacatcacgggaatcctgtgg
aatctatcttccagtgagaatctgaagagcactcttgcccgagatacactagagaagatc
acagaagagatccttgccccatcctcgggttggagtagtagtgtgagcatccggccatta
gcttcagaggatgaagtcttctacaataccactggctacattcgaaatctgagctcagga
aaagaagacacccgtcagaaaatgcgggaatgtaaaggtttagtggactctctggtctac
tttatccagcaatctctcgataacaatgcagccagcaagagcgtggagaattcagcctgt
gtcctgcgcaacttgtcctaccggctgtacgaagaaatgccatctttttatcagaaccga
ttggaaggccctggcaggaataacagaagtgtgaagaaaggtgatgttgtgggatgtttc
actcctcagagtaggaaggtgaaagagatcaatacagagtcggcaatattttcagaagtt
acaaaagatcccaaaggaatcgagtggctgtggaatccagctatcgtcacagtgtacatc
gggctcctagacaagagcgaggccaaccagcaaaccactgaagctgccttgggggctcta
caaaatattacagcaggggactttagggaaggctaa
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