Rhincodon typus (whale shark): 109923512
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Entry
109923512 CDS
T06055
Name
(RefSeq) LOW QUALITY PROTEIN: myelin-associated glycoprotein-like
KO
K06467
CD22 antigen
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109923512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109923512
04090 CD molecules [BR:
rtp04090
]
109923512
04091 Lectins [BR:
rtp04091
]
109923512
Cell adhesion molecules [BR:
rtp04515
]
Immunoglobulin superfamily
SIGLEC family
109923512
CD molecules [BR:
rtp04090
]
Proteins
109923512
Lectins [BR:
rtp04091
]
I-type lectins (Siglecs)
109923512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
V-set
ig
C2-set_2
Ig_CD22
Ig_5
K319L-like_PKD
Motif
Other DBs
NCBI-GeneID:
109923512
NCBI-ProteinID:
XP_048476539
LinkDB
All DBs
Position
47:complement(6094182..6127064)
Genome browser
AA seq
898 aa
AA seq
DB search
MIGKSYFLLLLLQGVATEEWTMTTAARKAINGSCVVIPCTFDFPSHPYKAVQGAWFKYWY
HWKYAVVYSNDPNYGMSTFVGRTDIIGDLEQKDCSLKINNLRPEDSDNYYFYVDVEGFEV
HTFKEPVHLKVLDVPDRPKMLLPRDLREGTSAYIICKALHTCPDNPPKLTWSDLPSSSVS
DTTESEGEIFTVLTFNPSYIHHHQTVRCICDYPQTNHRVFNSVTLSVKYSPCNTSVRMTT
GKGKTISLSCSGDGNPAVHRFSWFKISQGKVTDLTLSGQTRSVPYGFEVDISDYNVATNS
PGSSQSLPVQIPIEYGPRNLSITSPHIIKDSSININEGNSAVIICSVESFPASNLMWRYL
NVTMNKTSSNNELWLEIPHIAYSETGDYQCVAENAHGAVEGSITITLEYAPQNLSITSPH
IIQDSSINIIEGNSAVIICSVESFPASNLTWRHLNVTMNRTSSNNELWLEIPLITSRETG
DYQCVAENEYATEEGFISITVQYAPRNLLITSPVVIENSSINITEGNSAVIICSVNSFPA
SNLTWRHLNVTMNSTSSDNEVWLEIPHVTYRETGDYQCVAENEHGAENSFVTINVQYAPR
ETRVSTSGASGGIREGNDVTLTCSSESAPSISHYTWFRIEGNTSTQLNTSSRILSFTPVT
RGDDAGFYCTATNPLGDSSSNTTHLNVGYGPELSQESECAWRADGITCVCVANSNPPGHL
TWHLSHANLSGNQTHGGFESQQLRAGHLVMGSLFLMGHQDEEEVMASCSVRNPHGATMFK
LHLWVKGRDSNKWKVGLVMAGIMLNVFLAGILIFLCVRKRKTATEETASKTNEIGLTYSQ
LSVKHQGSQNMVVTDLQNTTRDTTREGETSGPQDVFDGAVGRDTGHQDRPSPSQHQLY
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgattgggaaatcttacttcctgctattacttcttcaaggcgtggcgacagaagaatgg
acaatgacaactgcagctcggaaggctatcaatggttcatgtgtggtcataccctgtacc
tttgactttccgtcacacccttacaaggccgtgcagggagcttggtttaaatactggtat
cactggaaatacgctgtcgtctacagcaatgaccccaattatgggatgtccacctttgtt
ggacgtacagatataattggagacttggagcagaaggattgctccttgaaaattaacaac
ctcaggcctgaagacagtgacaactattatttttatgtggatgtggaaggattcgaagtt
cacaccttcaaagaaccagtccatctaaaggttctagatgttcctgaccgtccgaagatg
ttactcccgagggatttacgggaagggacgtcagcttatatcatctgtaaagccctccac
acctgccctgataaccctcccaaactgacctggagtgacctgccctcttcctcagtcagt
gacaccacagagagcgagggcgagatttttacagtgctgacctttaacccttcatacatt
catcaccatcaaactgtccgctgtatttgtgactaccctcaaaccaaccaccgagtgttc
aactcggtcaccttgagtgtgaagtattctccctgcaatacgtctgtcagaatgacaaca
ggaaaaggaaagaccatttctctaagttgttccggtgatgggaatccagcagtccacaga
ttcagctggtttaagatctcccaagggaaggtcactgatctgacattatctggtcaaact
agatctgttccttatggatttgaggtggatatttccgactacaatgtagcaacaaacagc
ccgggcagctcacagtctctccctgtccagattcccatagaatatggaccacggaatctc
tcaattacttctcctcatataattaaagattcatcaatcaatataaatgaggggaattct
gcagtgataatctgctctgttgagagcttcccagcttctaacctgatgtggagatatctt
aatgtcacaatgaacaaaacaagttccaacaacgagctttggttggagattcctcacatt
gcgtacagtgagactggagactatcagtgtgtggcagagaatgcacatggagcagtggag
ggctctataaccatcactttggaatatgcaccacagaatctctcaattacttctcctcat
ataattcaagattcatctatcaatataattgaggggaattctgcagtgataatctgctct
gttgagagtttcccagcttcaaacctgacgtggagacatcttaatgtcacaatgaacagg
acaagttccaacaatgagctgtggttggagattcctctcattacatccagggagactgga
gactatcagtgtgtggcagagaatgaatatgcaacagaggagggcttcattagcatcact
gtgcaatatgcaccacggaatctcttaattacttctcctgttgtgattgaaaattcatca
atcaatataacagaggggaattctgcagtgataatctgctctgtgaacagcttcccagct
tctaacctgacgtggaggcatcttaatgtcacaatgaacagtacaagttccgacaatgag
gtgtggttggagattcctcacgttacatacagggagactggagactatcagtgtgtggca
gagaacgaacatggagcagaaaacagcttcgtaaccatcaatgtgcaatatgccccacgg
gagaccagagtgtccaccagtggagcctcaggtgggatcagagagggaaacgacgtcaca
ctaacctgttccagtgaaagtgccccgtcgatatctcattacacctggttcaggatcgag
ggaaacaccagcacccaattaaacacaagcagccggattctctccttcactccagtcaca
cggggggatgatgcaggtttctactgcacagcaacaaacccattgggtgacagcagctcc
aacacaacccacctgaatgtgggatatggtccagagctttcccaggagtcggaatgtgct
tggagggcagatgggatcacctgcgtttgtgtggccaactcaaaccctcctggacacctc
acttggcacctgtcccatgccaacctcagtggtaaccaaacacacggaggttttgagtca
cagcagctcagagcgggccatctggtgatgggctctctgttccttatgggacatcaggat
gaagaggaagtgatggcatcatgctcggttcgaaacccacatggggcaaccatgttcaag
ctgcatctttgggtcaaagggagagactccaataaatggaaagtgggattggtcatggct
ggaatcatgctgaatgttttcctggctggaatattaatcttcctgtgtgtgcgcaagaga
aagacagcgactgaggagacagcatcaaagaccaatgagattggattgacctacagtcaa
ctctctgtgaaacaccagggttcacagaacatggtggttactgaccttcagaacacaacc
agggacacaactagagagggagagacatcaggtccccaggatgtctttgatggtgcagtg
ggcagagatactggacaccaagacagaccttctccaagccaacatcaactttattaa
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