Rhincodon typus (whale shark): 109923533
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Entry
109923533 CDS
T06055
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3 isoform X1
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109923533 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109923533 (tbl3)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109923533 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_Vps41
WDR54
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_VPS8
WD40_like
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
109923533
NCBI-ProteinID:
XP_048465368
LinkDB
All DBs
Position
21:43874049..43938231
Genome browser
AA seq
926 aa
AA seq
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MAAPSVHFKTNYAVSSKIEPFYKGGKVQINKDGTYMFCTCGTKVNIIDITTGKVTKSIEQ
EDQEDITCFSISPDDEILVTSSRALLLKQWDWKESACTRTWKAIHTSPVASMAFDSTSTL
LATGGCDSTIKIWDVIKQYCTHSLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRLWNLN
TSKCMMVLDAHYSAVTSLAFTSDGNTLVSSGRDKICIVWNLKTYKSERTVPVYETVEAVV
LLPENEDFTALGVTSKEPHFITAGSKGILRIWEAYSGRCVYSQCVPGKPKKDTEDDADEQ
SLTHCAIVPATHKLTTVTAEHNILSYDLFTLKLTCQFVGYNDEVLDVKFLGPSDTHIVVA
TNSPQLKVFELATLNCQILYGHTDTILALDVFKKGTKFASCSKDKTIRIWKMSKITGEVN
CVAQGLGHAHSIGIISCSRLKEGFIVSGSQDCTLKLWNLTKSLEINSEKATEPEILHADL
TEKVHDKDINSVVVSPNDKLVATGSQDRTAKLWSASDFSLIGVFRGHKRGIWSVQFSPMD
QILATSSADGTVKLWGLQDFNCLKTFEGHDASVLKTIFVSRGTQLLTSGSDGLLKLWTIK
TNECVKTLDAHEDKVWGLHCNKKDDMVVTGATDSCIIIWKDVTEIELAEEQAKQEDQILK
QQELSNLLHEKKYLKALRLAVSLDQPQTVLTVIKAILGESNGHERLESTILKLRQDQKES
VLKFCIVWNTNSKNCHEAQYVVQILLRNETPEQLLQFNGIKAALEGLIPYTERHFQRVNR
LLQASMFLDYMWQSMRLTGKSCDSDIQVEDMEMESFFSMDKTAVGAGKAAITPGSDWPQG
NKKQDDAKSTDNDSESSASNNGNFHKRKHFLPPCEYLKENLEPPSESSSDSEDARKSDNQ
RAKTSVRKIKQKPPSVRKKTKCLKRS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctctgtacatttcaaaacaaactacgctgtttctagcaagattgaacca
ttttacaaaggaggaaaagtacagatcaataaagatggaacgtatatgttctgtacttgt
ggaacaaaggtcaatatcattgatatcacaacaggaaaggtcacaaagagtattgaacag
gaggatcaagaagatattacctgcttcagtattagcccggatgatgagatattggtgaca
agtagccgtgccttactcctaaagcagtgggactggaaggagagcgcatgcactcgtacg
tggaaagctattcacactagtccagtggcaagcatggcttttgattctacctcaacatta
ttggctacaggaggatgtgacagtacaatcaagatttgggatgtcatcaagcagtactgc
acacatagtctgaagggttcctctggagttgttcacttggttgaatttcatcccgacatt
tcacgtcttcagctattttcctcttcgatggactataagatacggctctggaacctgaac
accagtaaatgtatgatggtgctggatgctcactacagcgctgtgacttcgctagcattt
acttcagatggaaatacacttgtcagctccggccgtgataaaatctgtattgtatggaat
ttgaagacgtacaaatcagagagaacagttcctgtgtatgagactgtggaagctgtagtg
ttactgccggagaacgaggatttcactgccttgggagtgacaagcaaagaacctcatttt
atcacagcaggcagtaaagggatccttcgaatttgggaagcttactccggaagatgcgtg
tactcacagtgtgtgcctggtaaacctaagaaagatactgaagatgacgcagatgagcaa
tctctgacccattgtgccattgttccagcaacacacaaactaaccactgtaactgctgaa
cataacattctctcctatgacctattcactttgaaacttacatgccagtttgtaggttat
aatgatgaagtgctggatgtgaagtttttaggtccatctgacacacacattgtggtagcc
accaacagcccacagctgaaagtatttgagcttgcaacgttaaactgtcaaatcctctat
ggacacacagataccatattagccctggatgtgtttaagaaaggcaccaaatttgccagt
tgttcaaaggacaaaaccattcgaatctggaaaatgagtaaaataactggggaagtgaat
tgtgtggcacaaggtctaggacatgcccacagcattggtattatttcttgctcacgattg
aaagaaggcttcatagttagtgggagtcaggactgcacccttaagctgtggaatcttaca
aagtcccttgaaattaacagtgagaaagctacagaacctgaaatcttacatgctgatttg
actgaaaaagttcatgacaaggatataaacagtgtggtagtctctccaaatgacaagcta
gtggctaccggctcacaggacagaactgcaaaactttggtccgcatctgatttctcactc
atcggagtgtttcgaggccacaagcgtggaatttggtctgtccagttttcgccgatggac
cagatcctagccacctcttcagcagatggcactgtcaaactctggggacttcaggacttc
aactgcttaaagacgtttgaaggccatgatgcttctgtactgaaaaccatttttgtgagt
cgtgggactcagctgttgaccagcgggtctgatgggttactgaaactatggaccatcaaa
actaatgaatgtgttaaaacattagatgcccacgaggacaaggtgtggggtctccactgt
aataagaaagatgatatggttgtcactggagccacagactcttgcataattatctggaag
gatgtgacagagatagaacttgctgaagagcaggccaaacaggaagaccaaattttgaag
caacaagaattatctaatttattgcatgagaagaaatatctgaaggctttaagattagca
gtttctttggaccaacctcagactgtgcttacggtaattaaagcgatacttggtgaatct
aatggacatgaaaggctggaatcaacaatactcaagttgcgacaagatcaaaaagagtct
gtgttaaagttctgcatcgtatggaacaccaattctaaaaactgtcacgaagctcagtat
gttgtccagattctcctacgaaatgaaactcctgaacaacttcttcaattcaatgggatt
aaagctgcgttagagggattaatcccctacactgagcgacatttccagagggtcaacaga
ctattgcaggcctcgatgtttttggactatatgtggcagagtatgaggctgactggaaaa
tcctgtgactctgacatacaagttgaagacatggagatggagtcattcttttcaatggac
aaaacagcggttggggctgggaaagcggcaattactccaggatccgattggccccagggg
aacaagaagcaggacgatgcgaagagtacggataatgacagtgaaagcagtgcctcaaac
aatggaaatttccacaagcgaaagcacttcctgccaccttgtgagtacctcaaagagaat
ttggagcccccctcagaaagtagcagtgattcagaggatgccagaaaatcggacaatcaa
agggcaaagacatctgtaagaaaaataaaacaaaagccacccagtgtgagaaagaaaaca
aaatgtctcaaaaggagctga
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