Rhincodon typus (whale shark): 109923560 Help Entry 109923560         CDS       T06055                                  Symbol gemin5 Name (RefSeq) gem-associated protein 5   KO K13133   gem associated protein 5 Organism rtp  Rhincodon typus (whale shark) Brite KEGG Orthology (KO) [BR:rtp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rtp03019]     109923560 (gemin5)    03041 Spliceosome [BR:rtp03041]     109923560 (gemin5) Messenger RNA biogenesis [BR:rtp03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      109923560 (gemin5)    mRNA cycle factors     P-body specific factors      109923560 (gemin5) Spliceosome [BR:rtp03041]  Other splicing related proteins   Proteins involved in snRNP biogenesis    SMN complex factors     109923560 (gemin5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_GEMI5 Beta-prop_RIG_2nd WD40_CDC20-Fz WD40 Beta-prop_EML_2 GEMI5_RBS WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_RIG_1st Beta-prop_EIPR1 TPR_IF140-IFT172 WD40_RFWD3 WD_LRWD1 Beta-prop_DCAF4 WDR90_beta-prop_4th TPR_Sec16 Motif Other DBs NCBI-GeneID:  109923560 NCBI-ProteinID:  XP_048459499 LinkDB All DBs Position 12:complement(65877375..65926261) Genome browser AA seq 1092 aa AA seqDB search MIVIIDINRKGEVIHRLRGHDGEIHFLSWCPQLCEPQFLSDMTSDTLELNGELTTEDATK DCFLASGSRDQTIRVWNATKGKGVITLKLPSLKRRGGGTDVGIKERIWLTVHWSRTCPTQ LFSSCFGGELLLWDLTKAGKQKWTLLGSSSEGQNHSRIVFNLSSVSLQDNRELLLSTSMD RDVKCWDLNTLECSWTQPTLGGFVYSLAFSPVNIGSLAIGVGDSMIRVWDTLSLQRAYDI KTLWQGIKSKVTALCWHPTKESTLAFGTDDGKVGIYEIYSNKPPQISSSYHRKTVYTLAW GPPLPPLATGGDGDGPAVTLYSCAGEGIILQHNPWKLTTDAQDVNRLIRETNGIKHKLPG RSELNWKPDGKILAIGNDDGSIEIFQAPRLKLLCTIQTHHKLVNAIRWHHPHGAQPELSS LIASGSNNAIVYVHNLKTVLESPPDTAITVTEPYRTLPGHTAKITSLAWSPHHDAMLVSA CYDGTAQVWDVLKEEPLSNYRGHIGRLLGVQWSPVDPDCVWTGGDDFTARQWEVSKQQHT QPPRGKKSIELEKKRPNCSKTKSKKARKRTEKGSVGQEGEESQENTTQNVVGSRNGSADR AEEEEEDCRDETEMAKLSNGTPRIAVSLDEPRAQENTDSVLPNSLHTVVSRTPQMKPDRL KDERRRERAEVTVKKKKGRSVLPLSTINDHQSKEQLLSDCVNLANILYSKESESQSRPGS GDEIQLGLFVDRAAVYRMFEEEGQNHLEAGHSEICYQLMLWKGDVRGALEMATERGELND ALVAMAPMAGYTVWMRTVEAFSKQLCFQEQYVKAATYLLYIHKVYEAVKLLQSHQLFREA IAIAKARLQPDDPLLKELYTNCASFMEKDGHYTIAAKCYLTAQSPYDAAKILARKGDVPS LQTAATVASIVGEQELSSLFSSRCSLDLLAQRDWQGAQDILRPQEGLLGQRLVLCTYELL YRYLADGNLILWKSMNPPCYHDWTLRRDEPLIHSVIAIWQCEFGITSADTERLKTAHQQL RITEHPEASPNTLPRLLMLYLAHDLSLAIACSLLSDWSQMVTALLNAVHRCISAGDFTLM REISKIALSEGK NT seq 3279 nt NT seq  +upstreamnt  +downstreamnt atgattgtcatcatcgatataaaccggaaaggggaggtgatacacagattgcgaggtcat gatggagaaattcattttctctcctggtgccctcagctctgcgagccgcagttcctcagt gacatgacctcagatacactggagctgaatggtgagctcacgacagaggacgctacaaag gactgttttctggcatcgggaagcagggaccaaacaatccgagtctggaacgccacaaag ggcaaaggtgtgatcactttgaagttgccatcactaaaacgaagaggaggaggaacagat gtgggaataaaggagcggatttggctgacagtgcattggtctcgaacctgtcccacccaa ttgttctccagttgttttgggggagagctgctgctctgggatctgaccaaggcggggaag cagaagtggacactgctggggtcatcatcagaaggacagaaccacagcaggatcgtcttc aacttgagttcggtctccctccaggataaccgtgagctgctgctctctacctcgatggac cgagatgtgaagtgttgggatctgaatacactggagtgttcctggacgcagcctacactt gggggctttgtgtacagcctggcattctctcctgtgaatatcggctccctcgctataggt gtgggtgacagtatgatcagggtgtgggacaccctctccctccagcgtgcttatgacatc aagactctatggcaaggaattaaatccaaggtcacagctttgtgttggcatccaaccaaa gagagcacattggcattcggaactgatgatggcaaagttggcatttatgaaatttattcc aacaagccccctcagatttccagctcctatcacaggaaaacagtttacaccctggcttgg ggcccaccactgccccccttggcaaccggtggggatggggatgggccggctgtgaccctg tacagctgtgcgggcgagggtatcatcctgcaacacaacccctggaaactgacgacagac gcccaggacgtcaaccggttaatccgggagaccaatggaatcaagcataaacttccaggt cgcagtgaactgaactggaaacctgatggtaaaatcctggctattgggaacgacgatggg tcgattgagatcttccaggctcctcgcttgaagctgttgtgcacaattcagacgcaccac aaactggtgaacgcgatccgctggcatcacccacacggcgcacagcccgagctgagctcc ctcatcgcatctggctccaacaatgccattgtctacgttcacaacttgaaaaccgtcctg gagagccctccggacactgcgataacagtgactgaaccgtacaggacgttaccagggcat actgcaaagatcacgagcctggcctggagcccacaccacgatgcaatgctggtctctgcc tgctatgatggcactgcgcaggtctgggacgtcctgaaggaggagccactgagcaactat cggggacacattgggagattgctgggggtccagtggtctcccgtcgatcctgactgtgta tggacgggaggtgatgacttcactgcacggcaatgggaggtttcaaagcaacagcacacc caaccacccagaggaaagaagtccatcgagttggagaagaaaagacccaactgctcgaaa accaaatccaaaaaggccaggaagcgaaccgagaaagggagcgttgggcaggaaggagaa gagagccaggagaacacgacccagaatgtggtgggcagcagaaatggcagtgctgaccgg gccgaggaggaggaggaagactgtcgggacgaaaccgagatggcaaagctgtccaatgga acccctcgaattgcggtttcactggacgagcccagagcacaggagaatacggattctgtt cttcccaacagcctacacaccgtggtgagccgaactccccagatgaagccagaccggctg aaagacgagaggaggagggagcgagcagaggtgactgtgaagaagaagaaggggcgatcc gttctcccgctcagtacgatcaatgatcaccaatcaaaggagcagctcctctcggactgc gtgaaccttgctaacatcctctactcgaaagagtctgagagccagagtcggccaggatcg ggagatgaaatccagctgggtctctttgtggacagggcagctgtatacaggatgtttgag gaggaagggcagaatcatctagaagctgggcactccgagatctgttaccagctgatgttg tggaaaggcgatgttagaggagctttggagatggccactgagaggggagagctgaacgac gctttagttgctatggcgcccatggctggatacacggtttggatgcgaacagttgaagcc ttttccaaacagctgtgtttccaggaacagtatgtgaaggctgccacttacctgctgtac attcacaaagtctatgaggcagtgaaactcctccagtctcaccagctgtttcgagaagcc attgccatcgccaaagcccgtttacagcctgatgatccattgttgaaggagctttacacc aactgtgctagtttcatggagaaagacggccattatacaatcgcagccaaatgctaccta acagcccagtctccttacgatgcggctaagatcctggcaaggaagggtgacgtgccttcg ctacagaccgctgcaacagtggcgtcgatcgttggggagcaggagctgtcctccttgttc tcctccagatgctccttggacctattagcccagcgtgactggcagggggcacaagacatc ctgcgcccgcaggagggtttgctggggcaaaggttggtgctgtgtacatatgagttactg taccggtatcttgccgatgggaatctgattctgtggaagagtatgaacccaccctgctac cacgattggaccttacggagggatgaacccctcattcattcggtgattgcaatctggcaa tgtgagtttggcatcacgtcagccgacacagagcgattgaagactgctcatcagcagctg aggataactgaacatccagaggcatctcccaacaccctgcccagactgctgatgctgtac ttggctcatgaccttagtctggccatagcttgcagtctactgtctgattggagccagatg gtcactgccttactcaatgctgtgcatcgctgtatcagtgctggagacttcactttgatg cgggaaatcagtaagatcgctctctcggagggtaagtga

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