Rhincodon typus (whale shark): 109923569
Help
Entry
109923569 CDS
T06055
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109923569
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
109923569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
109923569
NCBI-ProteinID:
XP_048474761
LinkDB
All DBs
Position
41:complement(4131140..4265961)
Genome browser
AA seq
821 aa
AA seq
DB search
MERSPFTRGQWASQSLRITAKELSIVNKRGTAALRERFSKYQKAAEEASSERKKGNTENL
PPTLRKGTLSILKKKWEIPENSTAQPVLPKSPVRINRADSRAQIAAVSPKAYSSFVPLSE
SDQNLETTPRVKSPRSPGVLSRFPYPGTESEGQAELKMERILSKEGNEVENGTAQDLTVS
SKIEKFNVPLNSLKMMFEKGDAHVQPKHRHHESPVKQATRDPLKSDVSKKWLDKTAEGSC
LIEDIERKAREGNSSGFDHTSSGTSPDKTESKVGTELADMQEQTSVKDRMALYQATASQK
ETSIQSPTTLDEHMLSGEVINTKELWGSREASNPKKLPQSDISTSDIEMNAGNRNEQKEN
VPPVPLTSTPPHAELQKGSVVETSNAWKNSTYEKPGNSQVNVENEEGTPKLSTQGIKQQR
STAEIQSSPAKSVKKFQLPARELCVTCQKTVYPMERLVANQQVFHNFCFRCSHCNTKLSI
GNFASLHGNVYCKPHFSQLFKSKGNYDEGFGHKPHKELWMAKTESDTTERKNEVAMDKSE
TKTENSGVDELSILKVGVLAASMEALVTSTPPEKVEKPVETRKLKIAWPPPNEAGSKGIG
SSEESLRVNKPKWPPEDDFQHLTKRNSEFIGTSRLRRSASLKERCRPFTIAAPLRPIAIK
EPGRNPSAKNTTQDLIIKEREAKRETDERKNENESTLENEHEQPVTTELEGTQEDLVTEK
VVEVKSNKKLLQDEDVEELHLHKEEAREPDFLECEEQESKQKMVESQTSGETRTSNEHIP
ENERKLEDIGFWDGDETEVEGTAELSVEEQIKRNRCYEDED
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggagcgatcaccgttcactagagggcaatgggcctctcaatccctgcgaattactgcc
aaagagctgtctatagttaataaaaggggaacggcggctctcagggaacgtttttctaag
tatcagaaagcggcagaggaagcaagcagtgaacgaaagaaagggaacactgaaaatctt
cccccaaccctgaggaaagggacattgagcatcttgaaaaagaagtgggaaattccagaa
aattccacagcacaaccagtgcttccaaaatcgcctgtcagaattaatcgtgcagattcc
cgggctcagatcgctgctgtcagcccaaaagcatactccagctttgtgcctctaagtgag
tcggatcagaatttggagactaccccgagagtcaagtctcccaggagcccaggggtcttg
agcagatttccttatcctggtacagagagtgaaggccaggctgagttaaagatggaaaga
attctttctaaagaggggaacgaagtggagaatggaacagcacaagatttgacagtctcc
tctaaaattgagaagtttaatgtcccactgaacagcttgaaaatgatgtttgagaagggg
gatgcacatgttcagcctaagcacagacaccatgaaagcccagttaagcaggctaccaga
gatcccctcaagtctgatgtttccaaaaagtggttagacaagactgcagaaggcagctgt
ttgattgaagacatagagagaaaagcaagggagggaaactccagtggttttgaccatacc
tcgtctggaacaagccctgataaaacagaatctaaggttggtacggagttggcagatatg
caggaacagacatcagtgaaagacagaatggcattataccaggctactgcatcacagaag
gagaccagcatccaatctcctacaactttggatgagcatatgctgtctggagaagtgatc
aataccaaagagttatggggaagccgagaagcatcaaatcctaagaagttgccacagtct
gacataagcactagtgacattgaaatgaatgctggcaataggaatgaacaaaaagaaaat
gtgccaccagtacctttgaccagcacccctccccatgcagaactgcagaaggggtctgtg
gttgagacatcgaatgcttggaaaaattctacttatgagaaaccaggaaatagtcaagtt
aatgtggaaaatgaagaagggacgccaaagctttcaactcagggtataaagcaacagaga
tcaactgcagaaatacaaagtagtccagccaaatctgttaagaaatttcagcttccagct
agagagttgtgtgtcacctgccaaaagactgtctatccaatggagcgtcttgttgcaaac
cagcaggtgtttcataatttctgcttccgctgcagccattgcaacactaagctgagcatt
gggaattttgcttcactacatgggaatgtgtactgcaagccacatttcagccagctcttc
aaatccaaaggtaattatgacgagggatttggtcataagccacacaaggagctgtggatg
gccaaaactgagagtgacactacagaacgcaagaatgaagttgccatggataaatctgag
accaaaactgagaactctggagtagatgagctttccatactcaaggtaggtgttttggct
gccagcatggaggccttagttactagtactccaccagaaaaggtggagaaacctgtcgaa
acaagaaaattaaaaatagcttggccaccacctaatgaagcaggtagtaaaggaattggc
tcttctgaagagagcctccgagttaacaaaccaaaatggcctccagaggatgatttccaa
cacctgaccaagagaaactctgaattcattggtacctccagactgagacgaagcgcttct
ctgaaagaacgatgtagaccatttaccattgctgcacctctgagacctatagccattaaa
gagccaggaagaaatccatctgctaaaaatacaacacaggatctgatcattaaagaaaga
gaagccaaaagagagactgatgaacggaagaatgaaaacgagtcaactctggaaaatgag
catgagcaaccagtgactactgagctcgagggcacgcaagaagatttggtgactgaaaag
gttgtagaagtgaaaagcaacaaaaagctgcttcaagatgaggatgtagaggaacttcac
ctccacaaggaagaggccagagaacctgactttctggagtgtgaggagcaggaatccaaa
caaaaaatggttgaatcgcaaacttctggagagacacgtacctcaaatgagcacattcca
gagaatgagagaaaactggaagatattggtttttgggatggggatgaaactgaagtggag
ggaactgcggaactgtcagttgaagaacaaatcaagagaaatagatgttatgaagatgag
gattag
DBGET
integrated database retrieval system
