Rhincodon typus (whale shark): 109923599
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Entry
109923599 CDS
T06055
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109923599 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109923599 (supt20)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
109923599 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
109923599
NCBI-ProteinID:
XP_048453865
LinkDB
All DBs
Position
6:26659028..26741121
Genome browser
AA seq
820 aa
AA seq
DB search
MTRLPQQGKLRRNVNLLEKLVMQERVSCLVINLYPGNEGYSLMLRGKNGSDSETIRLPYE
EGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVVAEVRDYRQSGHVKAPTYQSRHILLR
PTMQTLICDVHAITSDNHKWTQDDKLVLESQLVLHTSEPLCLDPSFTVTCTTNRLLYNKQ
KMNTRPMKRCMKRYSRPALNRQQEIAQFTPPPHLKLFDYLQRRKERKPAPHIDLKISKAG
SCVDMWKQNPCQLTVPSEIDVEKYAKVEKASKSDDLQTAVWPIHEAKDEYIFEWEGTEQV
HASKLIIYQSSDDPLFYGKIQMTKDPKPEEENEHLVTHIPFPIGTKAEADRFVRQYFEVL
QQDTKCPVKISHNSAGSVSQSHLSPGKEIEQSEEISGSVQSSILGKGVKHRPPPIKLPSG
ASNSSSGNVFSPLQSSGHLKSTTPPPPPNKSVSLSRKHSMDLNQVNILSPPAMSPVGSSQ
RSGTPKPSTPTPTNTPSSTPHPSDVQTPASTATPSATPSTQESGLNPQTLLTPFAQQQMA
LSQALPVMTIPLSTMVTSITTGSSSSQVMTNPAGLNFINVVGSVCGAQTLMSGSNPMLGS
NAGAITPSGLNLSSILPPAGLVPSSLPAAMQSAAQAGGSFVGLKNTPGFRPLNLLQLSSC
PPVIFNPLQQQQLPQFSQQQSSQQSAISSPQQQGEQNSDQAPASQEQALTAQQTAVINLA
AGFVPPQAAVLSQLGSAVNRPGQSLPQQRLQLTSALQQQQQQALQQQQQIQQLRYLQRQM
AIAVQLRQQQQQQQQQQQQQHSGSQSKSKRKRGTPTPPKS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgacaagattgccccaacaggggaaattaagacgaaatgttaacctgttggaaaaactt
gttatgcaagaaagggtgtcatgtcttgtaataaatctatatccgggaaatgaaggctac
tccctaatgctcagggggaaaaatggatcagattcggaaacaatccgattgccttatgag
gagggagagttactagaatacttggatgcagaggaactaccaccaattcttgtagacctt
ttggaaaaatctcaggtgaacattttccactgcggatgtgtcgtagctgaagtacgagat
tatcggcagtctggccacgtgaaagcacctacataccaaagccgacatatattgcttcgg
cccacaatgcagacattgatttgtgatgtacatgccataacaagtgacaaccacaaatgg
acacaggatgataaacttgtccttgaaagccaattggtgctccatacatcagagcctctt
tgcctagacccttccttcactgtaacatgcacaaccaacagacttctctacaataaacaa
aagatgaatactaggccaatgaaaaggtgtatgaagcggtattctcggccagcactgaac
agacagcaggagatagcccaattcacaccaccacctcatcttaaactgtttgattatcta
caaagaagaaaagaaagaaagccagcaccacacattgaccttaaaatttcaaaagctgga
agttgtgttgatatgtggaagcaaaatccatgccagctcacagtgccatctgaaattgat
gtggaaaagtatgcaaaagtggaaaaagctagcaaatctgatgacttgcaaacagctgtc
tggccaattcatgaagcaaaggatgaatatatttttgagtgggaaggaacagaacaagtt
catgcctccaagttaataatttaccagtcatcagatgatcccctcttttatggtaagata
caaatgacgaaggaccccaaaccagaggaagaaaacgaacacttggtaactcatatcccg
ttccctataggtacaaaagcagaagctgacagatttgtaaggcagtattttgaggttttg
cagcaggataccaagtgcccagtgaagatttctcacaattcagctggctcagtgagccag
agtcacttgtctcctgggaaagaaattgagcaatctgaagaaatttctggatctgtccag
tcttctatactggggaagggtgtgaagcaccgaccgccacccataaaactccctagtggc
gccagtaacagttcttcaggaaatgtgtttagtccattgcaatcaagtggccacctgaaa
tccacaactccccctcctcctccaaacaaaagtgttagcctgtctagaaagcattctatg
gatcttaatcaagtgaacatcctctcaccaccagcaatgtctccagtgggttcttcacaa
agatctgggactcccaagccatctacccccacaccaaccaacaccccttcatcaactcca
cacccttctgatgtgcaaaccccagcatctacagccactccctcagctaccccatctaca
caagaatcaggcctcaatccgcagacccttttaaccccttttgcccaacagcagatggct
ctcagtcaagctttgccagtaatgaccattcctctttccactatggtaacttccattaca
acagggagttcatcctcccaggtgatgacaaacccagcgggtctcaacttcatcaatgta
gtgggctcagtttgtggagcacagacattgatgagtggttcaaatcctatgctggggagt
aatgctggtgctataactccttcaggcttaaatctgagcagcattctaccaccagctgga
ctggtgccaagctcactgccagctgccatgcaatctgcagctcaagcaggtggttcattt
gttggtttaaaaaatactcctggtttccgacctttgaatttacttcagctgtcaagttgc
ccgccagtgatcttcaatccactacagcagcaacagctcccccagttttctcagcaacag
tcatcccagcagtctgcaatctccagccctcaacagcagggagaacagaattctgaccag
gctccagctagccaggagcaggctttaacagctcagcagactgcagtcatcaacctggca
gcaggttttgtgcctccacaggctgcagtgttgtctcagcttggctctgctgtgaacaga
cctgggcaaagccttcctcagcagagactccagcttacatctgccttgcagcagcaacag
caacaagccttgcagcagcagcaacagatacaacagttacgatacttgcaacgtcaaatg
gctatagcagttcagcttcggcaacaacaacaacagcaacaacagcagcagcagcagcag
cattcaggcagccagtcaaaaagtaaaaggaaaagaggaactcctactccaccaaaatca
tga
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