Rhincodon typus (whale shark): 109923618
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Entry
109923618 CDS
T06055
Name
(RefSeq) alpha-soluble NSF attachment protein
KO
K15296
alpha-soluble NSF attachment protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109923618
Membrane trafficking [BR:
rtp04131
]
SNARE
SNARE associated proteins
Others
109923618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP
TPR_12
TPR_7
NSF
Spatacsin_C
TPR_2
TPR_30
RPN6_N
TPR_16
TPR_1
ARM_TT21_4th
RPN7
Motif
Other DBs
NCBI-GeneID:
109923618
NCBI-ProteinID:
XP_020379254
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Position
39:complement(5051862..5075071)
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AA seq
295 aa
AA seq
DB search
MDNSAKEREAMGLMAEAEKKVRSARSFMASLFGGSSRLEEACEMYARAANMFKMAKNWSA
AGNAFCEAAKLHLHLQSKHDAATNFVDAGNAFKKADPQEAINCLNRAIEIYTDMGRFTIA
AKHHISIAEIYESELVDIEKAIAHYEQAADYYKGEESNSSANKCLLKVAAYAAQLEQYPK
AVEIYEQVATTAMDSPLLKYSAKEYFFKAALCHFCIDMLNAKLAVSKYEEMFPAFSDSRE
CKLVKKLLDAFEEQNVDGYTDAVKEYDSISRLDQWLTTMLLRIKKTIQGEESDLR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggacaattcggccaaggagcgggaggcaatgggcctgatggccgaggccgagaagaag
gtccgctcggcccgatccttcatggcgtccttgttcgggggatcttctagattagaagaa
gcatgtgaaatgtatgccagggctgcaaacatgtttaagatggccaagaactggagtgct
gcaggtaatgccttctgtgaggctgctaaactccacctccacttgcagagcaaacatgat
gcagctacaaactttgtggatgcgggaaatgccttcaaaaaagctgatccccaagaggcc
attaattgtttgaacagggctatagagatttatacagatatgggtcggtttacaattgca
gcgaagcatcacatatcgatagcagagatttacgagagcgagttggtggacatcgagaag
gcaattgcacattatgagcaggcagctgattactacaaaggtgaagagtctaacagttct
gcaaacaagtgcttactgaaagtcgccgcatatgctgcgcagcttgaacagtatcccaaa
gctgtagagatatacgagcaggtagctactacagccatggacagcccgctcctgaagtac
agtgcgaaagaatatttctttaaagctgctctctgccacttctgtattgatatgttaaat
gctaagttggcagtttcaaaatatgaggaaatgttcccagctttctccgattccagggaa
tgcaaactggtcaagaagttgctcgatgcctttgaagaacagaatgtcgatggctacacc
gatgcagtgaaggagtacgattctatctctcggttggaccagtggttgactacaatgctt
ctacgcatcaagaagaccattcagggagaagagagtgatttgcgttaa
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