Rhincodon typus (whale shark): 109923654
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Entry
109923654 CDS
T06055
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109923654 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109923654 (exosc8)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109923654 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PanZ
Motif
Other DBs
NCBI-GeneID:
109923654
NCBI-ProteinID:
XP_020379296
LinkDB
All DBs
Position
6:complement(26741179..26767832)
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AA seq
281 aa
AA seq
DB search
MAAGFKMVEPLEYYRKFLKENCRPDGRELGEFRTTTLNIGSITTADGSALVKLGNTTVVC
GIKVEFATPTVDASNKGFIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIFDVIENSQIIQ
KEDLCIEKGKLAWVVYCDMVCLDYDGNLLDACIIALLAALKNVQLPSVSISEETGLAVVN
MNQKNQLNIRKHPVATSFAIFDDTIFIVDPTAEEETLASGMATIVTDEEDRLCAVHKPGG
SGLSSEKLQDCIVRAQTRHREVHKLLTEVMKSVTPTINVKE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaatggtcgagcctttggaatactacagaaaatttctgaaagaa
aattgtcgacctgatggaagggagctgggtgaattcagaacaacaactctcaacataggt
tcaattacaactgcggatggttctgcactagtaaagctgggaaacacgacggttgtttgt
ggcattaaagtggaatttgcaacaccaacagtagatgcatcaaataaaggatttatagtg
ccaaatgtagatttaccaccattatgttcatcgaggtttcgacctggccctcctggggaa
caagcacaagcagcaagtcagtttatttttgatgtcatagaaaattcacagatcattcag
aaggaggatctctgcattgaaaaagggaagcttgcttgggttgtatattgtgacatggtg
tgcttagattatgatggaaacttattggatgcctgtataatagctctgctagcagcactg
aaaaacgtacaattgccatcagtatcaatcagtgaagaaactggtttggcagtagttaac
atgaatcagaaaaatcaactgaatatcagaaagcatccagttgctacatcttttgcaatt
tttgatgacacaatattcattgtcgatccaacagcagaggaggagacattggcatcaggg
atggctacaatagtcactgatgaagaggataggctttgtgctgttcataaaccagggggg
agtggtctctccagtgaaaaactccaggattgtattgttcgtgcacaaacaagacaccga
gaagtccataaactgctcactgaagtaatgaagagtgtaacacccacaataaatgtgaaa
gagtga
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