Rhincodon typus (whale shark): 109923701
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Entry
109923701 CDS
T06055
Symbol
rrn3
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109923701 (rrn3)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
109923701 (rrn3)
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
109923701
NCBI-ProteinID:
XP_048465467
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Position
21:complement(4061573..4100170)
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AA seq
638 aa
AA seq
DB search
MDFVKEELAEGSSLDSFEDGFHLTMLGESEFFSSPPRKAVRFGGTVTEILKKYKQGDTVD
YDLLMTQLDDPEIKDAQIINWLQEFRDAVAQLTKDFEHVVSKILKLPWLSRSPVVIEEYL
AFLSNLVSAQTVYLRSCLSMLVSSFVPGRIVVQENGVDISDSEDEDENLPRNFDICHRAL
QIIAKYVPSTPQFLMPILVEKFPFANKSARILECYVHNLLRITVYFPVLRLKILELVVEK
FLKLDVSASRNDIEDAEEAVAEAKNGLSTCAEEGLFDMDEDEGKRKIHLSLPNDEMAHPV
AERLDILMSVLLAYIKDICYDNGELALTRTKELYRDLIVVFDKLVLPTHASCHVQYFMFY
ICSFKLGLAEAFLEHLWKMMQNPNNPAIIRQAAAGYIGSFLARATYIPVLTVKTCFDLLV
PWIHDYLDNQDAGTKAYCDVALHGPFYSACQAVFYIFIFRYKQILDRNLKKGLAYLQNLN
FERIVMCQLNPLKVCLPSVVNLFAAITRKFQLAFCYTVIERNNRQLIPVVRSSTGGDLIQ
ICTNPLDSFFPFDPYILKRSKKIFDGIYRVWEDLSLQDIQVPQKITKLETAEDEEDDFLK
GESLQNETIGITPSSLESHMHSPSSVGSPLAVFPLHHF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtaaaggaagagttggcagaaggatcaagtttggattcttttgaagacggc
ttccatttgacaatgttgggagaaagtgagttcttcagttccccaccaaggaaagctgtc
agatttggtggaacagttacagaaatcttaaagaaatataaacagggagatactgtggat
tatgatttgctgatgacacaactggatgatccagaaataaaggacgctcaaataatcaac
tggcttcaggaatttcgtgatgctgtagcacaattaacaaaggattttgaacacgttgtt
agcaaaatactgaagctgccgtggttgtcccgaagcccagtggtaatagaggaatacttg
gccttcttaagtaacctagtatcagcacagacagtgtatctgaggtcttgccttagtatg
ctggtctccagttttgtaccagggagaattgttgtccaagaaaatggtgtggatatttca
gactctgaagatgaggatgaaaatctccccagaaattttgatatttgtcatcgagctcta
cagatcatagcaaaatatgtgccttctacaccacaatttttgatgccgatactggttgaa
aaatttccatttgcaaacaaatcagccagaatcctggaatgttacgtgcacaatttactg
aggatcactgtatatttcccagtgctgcgcttaaagattttggaacttgtagtggaaaaa
ttcctaaaactggatgtaagtgcgtctcgtaatgacattgaggatgcagaagaagctgtt
gctgaggctaagaatggattgtctacatgtgcagaggaaggcctctttgacatggatgag
gatgaagggaagcggaaaattcatttgtcactgccaaatgacgagatggctcatccagtg
gctgaaagattggatattctgatgtccgttttgctggcttacataaaggacatttgttac
gataatggcgagttggcattgaccaggacaaaagaattgtaccgagacttaatagtcgtg
tttgataaactggtcttacccactcatgcttcttgtcatgtccagtatttcatgttctat
atctgcagcttcaaattgggattggcagaagctttccttgaacacctttggaaaatgatg
cagaatccaaataatcctgccataataagacaagcagctgcaggctacattggaagtttt
ctggcaagagcaacgtatattcctgtgctcactgtgaaaacttgtttcgatttgctggta
ccctggatacatgactaccttgacaaccaagatgctggaacgaaagcttactgtgatgtg
gctctgcatgggccattctactctgcttgccaagctgtattttacatcttcatattccgt
tataagcaaatactggatcgaaatctgaaaaaaggtttagcatacttacagaatctaaat
tttgaacgcatagtgatgtgccagctgaatcctctaaaagtctgtttaccatccgttgtc
aacttgttcgcagctattactaggaaatttcaattagctttttgctacacagttattgaa
cgaaataaccgacaacttataccagttgttaggagcagcactggaggggacttgatccag
atttgcacaaatcctcttgatagcttctttccctttgatccctatatccttaaaaggtct
aagaaaatatttgatggtatttatcgggtttgggaagatttgagccttcaagacattcag
gttccacagaaaatcacgaaactggaaacagctgaagatgaggaggatgatttcttaaaa
ggcgaatcattgcaaaatgagactattgggatcacaccaagttctttggagtcccatatg
catagccctagcagtgttggatctccacttgctgtgtttccactgcatcatttttga
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