Rhincodon typus (whale shark): 109923797
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Entry
109923797 CDS
T06055
Name
(RefSeq) far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109923797
03041 Spliceosome [BR:
rtp03041
]
109923797
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109923797
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109923797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
Motif
Other DBs
NCBI-GeneID:
109923797
NCBI-ProteinID:
XP_048473838
LinkDB
All DBs
Position
38:2283324..2327016
Genome browser
AA seq
683 aa
AA seq
DB search
MADFAAAAPPHAVGAGAAGAGTGAGGAAFKKPDAFADAVQRARQIAAKIGGDTATTVNHS
TPEFGFVGQKRQLEDGDQPDSKKIAAQSDPIGAQLAAIHQQRATLTEDYRVPDGMVGLVI
GRGGEQINRIQQESGCKVQIAPESGGLPERCVSLTGNSESIQTAKMLLDEIVSRGRGGPP
GQTHDATNGQNGSIQEIVIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQNANVDK
PLRIIGDPFKVQQARDMVMEILHERDQGGFGDRNEFGNRGAGGVGGLDVPVPRHSVGIVI
GRSGEMIKKIQNDAGVRIQFKPDDGSTPDKIAHVMGPPERCQHAAQIITDLLQNVRAGPT
GPPGPGMPGPGRGRGRGQGTWGMGPPGGEMAFSVPSHKCGLVIGRGGENVKAINQQTGAF
VELQRQPPPNGDPNFKLFTIRGSPQQIDHAKQLIEEKIEGPLCPVGPPMPAGPMGPFQPG
PFTQGPPGAPPPHPAAGGPPPPHQYPPQGWGNTYQQWQPPGPHDPSKAPGDPNAAAWAAY
YQQYYQQPPAPVPPQQPAAAPPGPDPTQQPPVQGPGGQPDYTKAWEEYYKKLGQQSQPGQ
QPGPQQDYTKAWEEYYKKQAQNAQGAAAAAAAAAAAAPQPGAQPDYSAAWAEYYRQQAAY
YGQPGAPQPAPQQPPAQQGQPTQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttcgcggcagcggcgcccccgcacgcagtcggtgccggcgcggccggagct
gggaccggggctggcggtgcggctttcaaaaagccggacgctttcgccgatgcggtgcag
cgggcacggcagatagctgctaaaattggaggtgacactgccacaacagtaaaccacagc
acaccagaatttggatttgttggtcaaaagagacaactagaagatggagatcagccggat
agtaaaaaaatagcagcacaaagtgatccaatcggggctcaacttgcagcaatacatcag
caaagggcaacccttacagaggattacagagtgccagatgggatggttggtcttgttata
ggcagaggtggggagcagataaaccgaatacagcaggagtctggttgcaaagtacagatt
gctccagaaagtggaggtttaccagaacgatgcgtctcactgacaggaaattcggaatca
attcagacagcgaaaatgctactggatgaaattgtgtcaaggggtcgaggtgggcctcca
ggtcagacccatgatgccacaaatggacaaaatggatccattcaggagattgtgatccca
gcaggaaaggctgggctcattattggcaaaggaggagagaccatcaaacagctccaggaa
cgtgctggagtgaagatgattttaatccaagatggttcacaaaatgctaatgtagataaa
ccactccgaattatcggtgatccttttaaagtacagcaagcacgagacatggtgatggag
attctgcacgaacgcgatcaaggaggatttggggacagaaatgagtttggcaatcgagga
gctggtggagtcggtggtttagatgtcccagtgccgcggcattcagtgggaattgtgatt
ggacgtagtggagaaatgatcaagaaaattcagaacgatgctggggtccgaatacagttc
aaaccagatgatgggtctacgccagataagatagcgcatgtaatggggcctccagagaga
tgccagcatgctgcacaaataataactgaccttctgcagaacgtgcgggctggtcccact
gggcctccaggacctggaatgcctgggcctggccgaggaaggggaaggggacaaggcacg
tggggtatgggcccccctggaggagagatggctttctcagtccccagccacaagtgtgga
ttggtcattggcagaggtggagaaaatgtaaaggcaataaaccaacagactggtgcattt
gtggaactgcagagacagcccccgcctaatggtgatccaaactttaaacttttcaccatc
cgagggtcacctcaacagattgaccatgctaaacagctcattgaggagaagattgagggt
cccttgtgtcctgttggacctccaatgcctgctggccctatgggacccttccagccggga
cccttcacccaagggcccccaggagctcctcctcctcatcctgctgctggtgggccacct
cctccacatcagtatcctcctcaaggttggggcaacacgtaccaacagtggcagccgccc
ggaccacacgacccaagtaaagctcccggagacccaaatgcagctgcctgggctgcctat
tatcaacaatactaccagcagcctcctgcacctgtgccaccccagcagccagctgctgct
ccaccagggccagaccccactcagcaacctccagttcaaggcccaggaggacagcctgat
tacactaaagcgtgggaggaatactacaagaaactaggccaacagagccagcctggccag
cagcctggtccccagcaggattatacaaaggcgtgggaggagtactataagaaacaagct
caaaatgcccaaggggcagcggcagcggcagcagcggcggcagcagcagcaccacaacca
ggagcccaaccagattacagtgcagcctgggctgagtactacagacagcaggcagcttac
tacgggcagccaggggcacctcagcctgccccccagcagccacctgcacaacaagggcaa
ccgacacagtga
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