Rhincodon typus (whale shark): 109923956
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Entry
109923956 CDS
T06055
Name
(RefSeq) paired box protein Pax-7 isoform X1
KO
K09381
paired box protein 3/7
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109923956
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109923956
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
109923956
NCBI-ProteinID:
XP_048471178
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All DBs
Position
31:complement(16545367..16666080)
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AA seq
503 aa
AA seq
DB search
MTSLTGTTPRMMRPSPGQSYSRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
FKRENPGMFSWEIRDKLLKDGICDRSTVPSVSSISRVLRAKFGKRDDDEEMEKKEEEGGR
KTKHSIDGILGEKGNRLDDGTSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHY
PDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTLP
PYQLPESSYPTTTLSQDGGSTVHRPQPLPPSSMHQSGLAAAAESGSYGLTSNRHTFSSYP
DSFMNASGPNNPMNQVSNGLSPQVMSILSNPGAVPTQPQHDFSISPLHGSLDTSNPLSAS
CSQRSDSIKGVETLPSSQSYCTPAYSTSGYSMDPVPGYQYAQYGQSAVDYLTKNVSLSTQ
RRMKLSEHSAVLGLLQVETGQAY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctctaaccgggacaacaccgcggatgatgcgcccgagtccaggccaaagctac
agcaggaccggtttccctctggaagtgtccacccctctgggccaggggagagtaaaccag
ctcggcggcgtttttataaacggcagacccctaccgaaccacattcgacacaaaatcgtg
gagatggcacatcatggtatccggccctgtgtcatctcccggcagctgcgtgtctctcac
ggctgtgtctcgaaaattctgtgtcgctatcaagagacaggctcgatccgacccggggct
atcggaggcagcaagcccaggcaggtagcaacgcccgatgtggagaaaaagatcgaggaa
ttcaagagagaaaaccctgggatgtttagttgggagatcagggacaaactactcaaggat
ggcatctgtgacaggagcactgtaccttcagtgagctccatcagtcgggtgttaagagcc
aagtttggaaagagagatgatgacgaagaaatggagaagaaggaggaagaagggggcaga
aagactaaacatagtattgatggaatcctcggggagaaaggcaatcgcttggatgatggg
acctcggacgtggaatctgagcctgatctccctctgaaacgaaagcagcgacgcagtcgc
accacatttactgcagagcagctggaggagttggagaaagcctttgagaggacccactac
ccagacatctacactagagaggagctagcccagagaaccaaactcacagaggcacgagtc
caggtctggttcagtaatcgacgagcgcgatggcgtaaacaggctggagccaatcaattg
gcagcattcaaccacctgttgccaggtggcttcccacccactggaatgccaaccttgccc
ccataccagttgcctgagtcatcgtatccaacaactaccctctcccaagatggagggagc
actgtccacagaccacagcctctcccaccctcatctatgcaccagagtggcctggcagca
gcagcagaaagtggctcatatggtttaacgtccaatcgacacaccttctccagctacccc
gacagcttcatgaacgcatcaggacccaacaaccccatgaaccaggtcagcaatggactc
tctccacaggtgatgagtatcctgagtaaccctggagcagttcccactcagccacagcat
gatttctccatttccccactgcatgggagcctggacacctcgaacccgctctccgccagc
tgcagccagcgctccgactccatcaagggcgtggagaccctgcctagctcacagtcttac
tgcacacccgcctacagtacatctggatacagcatggaccctgtgcctggctaccagtat
gcccaatatggacaaagtgcagttgactacctcaccaagaacgtgagcctgtccacacag
aggcgaatgaagttgagcgagcactccgctgtcctgggtttgctgcaggtcgaaacgggg
caagcttattga
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