Rhincodon typus (whale shark): 109924072
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Entry
109924072 CDS
T06055
Name
(RefSeq) syntaxin-7-like isoform X1
KO
K08488
syntaxin 7
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04130
SNARE interactions in vesicular transport
rtp04140
Autophagy - animal
rtp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109924072
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109924072
04140 Autophagy - animal
109924072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109924072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109924072
Membrane trafficking [BR:
rtp04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
109924072
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109924072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
FAM184
Cep57_CLD_2
DUF6548
DUF6161
SAS4
T2SSF
DUF4191
Motif
Other DBs
NCBI-GeneID:
109924072
NCBI-ProteinID:
XP_020379679
LinkDB
All DBs
Position
5:complement(64392040..64427582)
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AA seq
267 aa
AA seq
DB search
MISNRNDGHLEETSSSLEAQKLAHVISSNIHKIAQYSAEIQKTLSYFGKPEDNIELRHQL
QQKQQLVNHLAKETEKNLKEFGLIKSLTDQRQRKIMKDRLVAEFTTALTNFQRIQREAAE
KEKEFVARVRAGSRLSQGLPDNENDAKLLSIDRPNQVQDEIEDGITVEDLELIKERESAI
RQLESDILDINEIFKDLGMMIHEQGDLVDSIEANVETAEVHVQQANQQLSRAAEYQRKSR
KKMFILIMVLVIIAVVVGIIIWVSVKK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgaataggaacgatggtcacttggaagaaactagttcatctttagaagcacaa
aagcttgctcatgttataagttcaaatatccataaaattgcacaatattctgcagaaatc
caaaagactttgagctacttcggtaaacctgaggataatattgaacttcgacaccagctt
cagcagaagcagcagttagtcaaccaccttgctaaagaaactgagaagaacttaaaggaa
tttggattaataaaatctttaactgaccagaggcaaaggaagataatgaaagatcgttta
gtagcagaattcactacagcactcactaattttcaaagaatccaacgagaagctgcagaa
aaggaaaaagaatttgtagcaagagtacgtgctggctcacgactgtctcaaggtttacct
gataacgaaaatgatgcgaaactgttgtcaattgaccgtccaaatcaggttcaagatgaa
atagaagatggaattacagtggaggacttggagcttatcaaagaacgagagtctgcaatt
aggcagctggagtctgatatcctggatattaacgaaatatttaaagacttgggaatgatg
attcatgagcaaggagatctagttgatagcatagaagccaatgtggaaactgctgaagta
catgttcagcaagcaaaccaacaactaagcagagcagcggaatatcagcgcaaatctcgt
aagaagatgttcatcttaattatggtattggtcatcatagctgtggtagtgggaatcatt
atctgggtttctgtgaaaaaataa
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