Rhincodon typus (whale shark): 109924099
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Entry
109924099 CDS
T06055
Name
(RefSeq) tight junction protein ZO-3-like
KO
K06097
tight junction protein 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109924099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Guanylate_kin
SH3_2
SH3_1
SH3_9
Prominin
Motif
Other DBs
NCBI-GeneID:
109924099
NCBI-ProteinID:
XP_048470219
LinkDB
All DBs
Position
29:12363048..12438757
Genome browser
AA seq
965 aa
AA seq
DB search
MAVRFQEAFVEMEETLIWEQHTVLINRDSKIGFGIAISGGTDKPNSTTGETAILVSDVVR
SGPAEGKIMIKDRIVMVNGVSMDNVTSSFAIQNLKRSGKSVNITVKRPRKIQIPVTNAAP
AASYYSSRPDYAHDDASDEDEDYDPADRRLRRIQNQNLYHGDSHHNNDYDQDSSRNYSYD
RSPSPSRSYDRSPSPSRSYDRSPNPSRSYDRSPNPSRSYNYQHNHRDHSARRVRREHNPS
GSYHDEFDDDDMHYVRARKPIKSCLFKSNANEEYGLRLGSQIFIKHMSSDGLASKEGVLK
EGDIILKINGVVTENISLEDTRTLIEKSEGELRLVILRDNEQFLINVPELVDSEEDSLEE
FSDIESERTDSPSDNRSKHILVDPPNTRKSNGSLKPNTKPVSEIDVSPTAPKPRHDAVVD
ERTYAAPIKTSNTSPQDGYNVGYSPDMKVARFVKDASVGLQLAGGNDVGIFVSRVLDDSP
AARQGIQKGDQILQVNNVNFQNLTREEAVLLMLDIPKGELVEIKAQRKEGIYQKMINSNV
GDSFYVRTHFDHEVEGTQELSFRRGEVFRVVDTMHKGKLGAWYAVRIGQDFKEQDKGTIP
SKNRAEQIAKAEITQKASSSSSSGARAEFWRMRGLRGAKKNIRKSRDDLSALTIQGKYPP
YERVVLREAPYKRPVVILGPISDIATLKLASDLPDQFELAQMVQRNSEEAGSSSVIKLET
VRLIAQKNKHGLLDITPSAIERLNYVKWYPIVVFFNPENKQEVKAMRQHLYPQSRKSSKS
LYNQAVKLRKYWSHLFTGTINLNSGSSAWYEALKATIKEQQTQAVWFPEEKSEETGAENL
ELLNRSTSMSMDYLSCDESRANSDYEDTDAEGGAYTDNELDDTLDEPAIIRSSEPVRTEA
SHISMEAAHEAPMAHSQIQPQGQYRDPHFARLHKQDLNAITSRRDLIYSSDEDDDDEWNG
PATEL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcagatttcaagaagcgtttgtagaaatggaagaaactctgatatgggagcag
cacacagtgttgataaatcgggattcgaagatcggatttggtattgcaatatctggagga
acagacaaacccaacagtaccactggggaaactgccattcttgtttcagatgttgttcga
tctggaccagctgaagggaagattatgataaaggacaggattgttatggtgaatggtgtt
tccatggacaatgtgacctcttctttcgccattcagaatctaaagcgttctggcaaatct
gtgaacataacggtgaagaggccccgtaaaatacagattcctgtgactaatgcagcacca
gctgccagctattattccagtcgaccagactatgcacatgacgatgcctctgatgaagat
gaggactatgatccagctgacaggagattgagaaggattcagaaccaaaatctgtaccac
ggtgactcccatcacaataatgactatgaccaggattccagcagaaactacagctatgac
cgaagtcccagcccctcaaggagctatgatcgaagtcccagcccctcaaggagctatgac
cgaagccccaacccctcaaggagctatgaccgaagccccaacccctcaaggagttataac
tatcaacacaaccaccgggatcacagtgctaggagggttagacgagaacacaacccaagt
ggaagttaccatgatgagtttgatgatgatgatatgcattacgttcgggctaggaaaccc
atcaagagttgcctttttaaaagtaatgctaatgaagaatacggcttgaggttggggagt
caaattttcattaaacacatgtcatcggatggccttgcttcaaaggaaggggtcttaaag
gagggagacattatactaaagattaatggtgtagtaactgagaatatatcactggaagat
acgaggacactaattgagaagtcagagggggagctgaggttggtgatcctacgagataat
gaacagtttctgatcaatgttcctgaactggtggacagtgaggaagatagcctggaagaa
ttttcagacattgagtctgaacgtacagattcaccaagtgataatcggtcaaaacatatt
ttggtggatcctcccaacacaaggaagagtaatggaagcctgaagccaaacacaaaacca
gtgtcagagatagatgtcagtcctacagctcccaaaccccgtcatgatgcagttgttgat
gagcgaacatatgctgctcctataaagacttcaaacacaagcccacaggatggatataat
gttggctacagtcctgacatgaaagtggcgaggtttgtcaaggatgccagtgttggcctg
cagctggctggaggcaatgatgttggaatattcgtatctcgagttctggatgatagtcct
gcagccagacagggaatccagaaaggagaccagattctgcaggtgaacaatgtcaacttc
caaaacctcacccgtgaagaggcagttttgctcatgttagatatcccgaaaggagagctg
gtggagattaaagctcagaggaaggagggcatttatcagaagatgatcaactcaaatgtt
ggagactccttctacgtacgaacacacttcgaccatgaggtagaaggaacacaggaacta
agcttcaggagaggtgaggttttccgagttgtcgacaccatgcacaaagggaagttggga
gcgtggtatgccgtgagaattggccaagacttcaaggaacaggacaaaggcaccatcccc
agcaagaacagggctgaacaaattgccaaagctgaaattactcagaaagcttcatccagt
tcatcaagtggagcacgggcagaattctggagaatgcgtggcctgagaggtgcaaagaaa
aacataaggaagagcagagatgacctttcagcattgactattcagggcaaatatcccccc
tatgaaagggttgttctgagagaagccccttataaaaggcctgttgtgattcttggacca
atttctgatattgctactctgaaactggccagcgatcttcctgaccagtttgaacttgcc
caaatggtacagaggaattccgaagaagcaggatcatcctctgtcatcaaacttgaaact
gtacggctaatagctcaaaagaacaaacatggcctacttgatatcacaccttctgccata
gagcgactaaattacgtcaagtggtacccgattgtggtattctttaatccagagaacaaa
caggaagtgaaagccatgaggcagcacctctaccctcagtcaaggaaaagctccaagagt
ctctacaatcaagctgtaaagctgaggaaatactggtctcacctctttacaggtacaata
aatctgaattctggttctagtgcctggtatgaagctttgaaagcaacaattaaggagcag
cagactcaggctgtgtggtttcctgaagaaaagtctgaagaaacaggggctgagaacctg
gaactgctgaaccgatcgaccagcatgagcatggattacctgagctgtgatgagagcaga
gcaaacagtgattacgaggacacagacgcagaaggcggagcttacacagataatgaactg
gatgacacactagatgagcctgcaatcattagatcttctgaaccagttaggactgaagca
tcccacatctccatggaagcagcccatgaagcaccaatggcccactcacagatccagcct
cagggtcagtacagggatcctcatttcgcaaggctacataaacaggatctcaatgcaatc
acatccagacgagatctaatctacagttcggatgaagatgatgatgacgaatggaatgga
ccggccactgagttataa
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