Rhincodon typus (whale shark): 109924175
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Entry
109924175 CDS
T06055
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
rtp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109924175
03015 mRNA surveillance pathway
109924175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109924175
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109924175
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109924175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109924175
NCBI-ProteinID:
XP_048470956
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Position
31:complement(54565..134203)
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AA seq
494 aa
AA seq
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MATDSWALAVDLQESAAESLSNLKLKEESSNAEPKEAMIKHDPSDKLDKTAKLDKSDNLD
IKQDDDDKEDKAAQSLLNKLIRSNLVQSTHQVEVLQRDPNSPLYSVKSFEELHLKKDLLQ
GVYGMGFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVDLSQRHPQC
LCLSPTYELALQTGQVIEQMGKYCPDIKLAYAVRGNRLEKGQKISEQIVIGTPGTVMDWC
TKLRFIDTKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEESVWKFA
QKVVPEPNIIKLKREEETLDTIKQYYVLCDNKEEKYHALCNIYGAITIAQAMIFCHTRKT
AGWLAAELSKEGHQVALLSGEMMVEQRAAVIQRFRDGKEKVLVTTNVCARGIDVEQVSVV
INFDLPVDKDGNPDCETYLHRIGRTGRFGKRGLAINMVDSKYSMNILNRIQDHFNKRIEK
LDTDDLDEIERIAN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggactcatgggcgctggcggtggatctgcaggagtcggcggctgagtcgctg
agcaacctaaagctgaaagaagagagttcaaatgctgaacctaaagaagcaatgataaag
cacgatccatctgacaaactggacaaaactgctaaactcgacaaaagtgataatttggac
atcaagcaagacgatgatgataaagaggataaggctgcccagtctctattgaataagcta
atccgcagtaatctggttcaatcgacacatcaagttgaagtactccagagagatccaaat
tcccctctgtactctgtgaagtcctttgaagagctgcatttgaaaaaagatcttctgcaa
ggagtatatggaatgggatttaacagaccttcaaagatccaggagacagcgttacccatg
atgcttgcagaaccccctcagaatctgattgcacagtctcagtcgggtactggtaagaca
gctgcctttgttttggccatgctcagtcgtgttgatctctcccaaaggcacccacagtgt
ttgtgtctttctccaacctatgaactggctttgcagactggacaggttattgaacaaatg
gggaagtactgtcctgatatcaagctagcttatgcagtgcgaggcaacagacttgagaag
ggtcagaagatttcagaacaaattgttattggcacacccgggacagtaatggattggtgc
acaaaactgagattcatagatacaaagaaaattaaagtttttgtcctagatgaggctgat
gtcatgattgcaactcaaggccaccaagaccagagcattagaattcagaggatgttgcct
aaagattgtcagatgctgctgttctcagctacatttgaagagtctgtgtggaaatttgcc
cagaaggttgttccagagcctaatattatcaagttgaagcgggaggaagaaaccttggat
acaattaaacaatattatgtcctttgtgacaacaaggaagagaaataccatgctctgtgc
aatatttatggagcaattaccatagcacaggccatgatcttctgtcatactcgcaagact
gcaggttggttggcagctgaattgtctaaagaaggtcatcaagttgcactgctgagtgga
gagatgatggtagagcaacgagctgctgtgatacagcgtttccgggatggcaaagagaaa
gtacttgtcacaactaatgtctgtgcaagaggaattgatgttgagcaggtctccgtcgtc
ataaactttgaccttccagtggataaagatggtaatccagactgcgagacgtaccttcac
agaattggacgaacaggtcgttttggcaaacgtggcttggctattaacatggtagacagt
aaatacagcatgaatatcctcaaccgaatccaggatcatttcaacaagcgcattgaaaag
cttgatacagatgaccttgatgagattgaaaggattgctaactga
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