Rhincodon typus (whale shark): 109924227
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Entry
109924227 CDS
T06055
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109924227 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109924227 (usp48)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109924227 (usp48)
Peptidases and inhibitors [BR:
rtp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109924227 (usp48)
Ubiquitin system [BR:
rtp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109924227 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
UvrD_C
Motif
Other DBs
NCBI-GeneID:
109924227
NCBI-ProteinID:
XP_048471043
LinkDB
All DBs
Position
31:34389813..34523543
Genome browser
AA seq
1048 aa
AA seq
DB search
MAPKQQLEKAAWQWTESVRPEEVKQEHIELAYRIRLGSCRRDARRRNCRGNPNCLVGLGE
HVWLGEIDENSFHNIDDPNSERRCKNTFVGLTNLGATCYVNTLLQVWFHNLELRQALYLC
HSPRKEMVTGEVIEDDAEFEPQSICEHLQYLFALLQSSNRRYIDPSGFVKALGLDTGQQQ
DAQEFSKLFMSLLEDTLSKQNNPDVQNIIQQQFCGQYAYVTVCNQCRRESKLLSRFYELE
LNIQGHKQLTDCIDEFLKEEKLEGDNRYFCDECQDKQNATRKIKLLSLPRTLNLQLLRFV
FDRQTGHKKKLNSYISFPEVLDLTTYLDRKDIGCIYELSAVLIHRGVSAYSGHYIAHVRD
DRTGDWYKFNDEEIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCVKGVHCSRNAYMLVYRR
KVEGGKEKEITVQLPSHLQKMVERDNKKFEEWCMEMAEMRKQSVDKGKAKHEEVQELFNM
LPAKEDEHYEFLPVDWLRKWLDDSAVTKPIDNSCHLCAHNRLIPDKICDVKRISQKAADV
FYARYGGGPRLDASALCRDCVVEKCRILRLKNQLNEDYKIISNLTRTTLQSHEGYWVGKA
SLRSWRQLALNQLDGKEDDPDHTDGKSNGEGLNNLHAKGDDEMIGEKDDDEDMNFNEDLV
CPHGDLCTSETERRLVSVETWNRLKAYFPKSPEFPHYHSPCVQCQVLEKEGEENETLSKM
MANEQKSALLCLFQDKNRPLLIKWPEETDVLYIVSQFFVEEWKKFIRKPTKCSPVSSVGN
NALLCPHGGLMFTAESMTKEDSKHVALLWPNEWEIIHKLFVVDNTIKVIRLMSTGESGTV
QLEYTTSPDLCGECREGLLCQQQRDLREYTQATIYIRKVVESIKVMKEGAPELNLSGSEA
EEEREECKVEGEKDPDFNQNNGAKRRKLTHPCIGGGNSSTYYKQGIRRSTRHRVRGEKEL
IVSANQTLKELKIQIMHAFSVAPFDQNLSLEGRMLTDDTATLGNLGVIPESVILLKADEP
IADYTAMDDIMQVCMPEEGFKGTGLLGH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaagcagcagctagagaaggcggcctggcagtggactgagagcgtcaggccg
gaagaggtgaagcaggagcacatcgagctggcgtaccgcatccgcctcggctcctgccgc
agggacgcccgcagacgcaactgtagaggaaacccaaactgcttagtgggtcttggtgaa
catgtgtggctgggagaaattgatgaaaatagcttccacaacattgatgatccaaactct
gaaaggagatgcaagaatacctttgtaggattaactaatcttggagctacttgttacgtc
aacaccttgcttcaggtttggtttcacaaccttgagttgcgacaagcactgtatctttgc
catagtcctcgaaaggagatggtgactggagaagtgattgaggatgatgcagaatttgaa
ccgcagtccatctgtgagcaccttcagtacttgtttgctttgttgcaaagtagcaataga
cgatatattgatccttctggttttgtaaaagcacttggcctggatacagggcaacagcag
gatgctcaagaattctccaagctttttatgtcactattagaggacaccctatcaaaacag
aacaatccagatgtacagaatattatccagcagcagttctgtggacagtacgcctatgtc
acagtgtgtaatcagtgcagacgggagtctaagctgttatctcgtttttatgaactggag
ttaaatatccaaggacacaagcagctgacagattgcattgatgaatttctgaaggaagaa
aagctggaaggggataacaggtacttttgtgatgaatgtcaagacaaacagaatgccact
agaaaaattaaactactcagccttccaagaacactgaatttacagcttttgaggtttgtc
tttgacaggcaaactggtcataagaaaaagctaaactcttacatcagctttcctgaagtt
ttagacctaactacataccttgatagaaaagatattggctgtatttatgaactgagtgcg
gtgctgatccacagaggggtgagtgcatattccggccattacattgcacacgtgcgagat
gacaggaccggcgactggtataaatttaatgatgaggagattgagaaaatggaagggaag
aagctacagttggggatagaggaagatcttgccgagccttcaaagtcgcagacacgaaaa
cccaaatgtgttaaaggtgttcactgttcgcggaatgcttacatgttggtgtacagacgt
aaagtggaaggaggcaaggaaaaggaaataactgttcaactcccatcacatttacaaaaa
atggttgaacgtgacaataaaaaatttgaggagtggtgcatggaaatggctgagatgcgg
aagcagagtgtggacaaaggcaaagccaagcatgaggaggtgcaagagctctttaacatg
ttaccagctaaagaagatgagcactatgaatttctacctgtggattggttacggaagtgg
ctggatgactcggcagtaacaaaaccaattgataattcttgccacctgtgtgcacataac
agactaattcctgacaaaatctgtgatgtcaaaaggatctctcagaaagcagctgatgtc
ttctatgctagatatggaggtggccccagattggatgcttctgctttatgtagagactgt
gtggtggaaaaatgcagaatacttagattaaagaatcagttaaatgaggattacaaaatc
atctccaacttgaccaggaccacattacaaagccatgaaggatactgggtgggaaaagcc
tcacttcgaagttggcgtcaactagcacttaatcagttggatggaaaggaagatgaccca
gatcatactgatgggaaaagcaatggagaaggcttaaacaatctgcatgccaaaggggac
gatgagatgataggagaaaaggatgacgatgaagacatgaacttcaatgaagatcttgtc
tgtcctcatggcgatttatgcacatctgaaactgaaagaagacttgtgtctgttgaaacg
tggaatagactaaaggcttatttcccaaagtcacccgagttcccacattatcactcgcct
tgtgtacagtgtcaggtattagaaaaggagggtgaggaaaatgagactctgagcaagatg
atggcaaatgagcagaaatcagcacttctgtgtctttttcaagataagaatagaccgctg
ctaatcaaatggcctgaggagacagatgttctgtacattgtttcccagttttttgtcgaa
gaatggaagaagtttatcaggaagccaacgaaatgcagtcctgtatcatctgtgggcaac
aatgcacttctctgtccacatggaggtctcatgtttacagcagaatcgatgaccaaagag
gattcaaaacatgtagctcttttatggccaaatgaatgggaaatcatccacaaattattt
gttgttgataatacgattaaagttattcgattgatgagcactggagaaagtggcacagtt
caactggaatataccaccagtcctgatctttgtggagaatgtcgggaaggtttactttgt
caacagcagcgagacttaagagagtacacacaggccactatctatatccgaaaagtagtg
gagagtatcaaggtaatgaaagaaggtgcaccagagctaaatttaagtggttcagaggca
gaggaggagagagaggaatgcaaggtagaaggagagaaggatcctgactttaaccagaat
aatggagcaaaacggcggaagctgacacacccttgtattggtggtggtaacagcagcaca
tactataaacaaggaattcgacgtagcacacggcatagagttcgtggagaaaaggagctc
atcgtgtcagcgaatcaaactctcaaagagttgaaaatacagattatgcatgccttttcc
gttgcaccatttgatcaaaatttgtcactggaaggacggatgctaactgatgacactgca
acactgggaaatctgggagtgatcccagaatcggtcattctgttaaaggctgatgaacca
attgctgattatacagcaatggatgatataatgcaagtatgtatgcctgaagaaggtttt
aaaggtactggtctattgggtcactga
DBGET
integrated database retrieval system
